RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 RXRAP19793 462 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 PPP1R21Q6ZMI0 780 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 CCDC155Q8N6L0 562 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 MCM9Q9NXL9 1143 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 PTPDC1A2A3K4 754 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 RPUSD2Q8IZ73 545 aaKnown RBP13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 EPSTI1Q96J88 318 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 TCIRG1Q13488 830 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 NCOA7Q8NI08 942 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 ERMNQ8TAM6 284 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 SELENOSQ9BQE4 189 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 USP25Q9UHP3 1055 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 UAP1Q16222 522 aaPredicted RBP13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 SMARCC1Q92922 1105 aaPredicted RBP13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 MAK16Q9BXY0 300 aaKnown RBP13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 FAM169AQ9Y6X4 670 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 HSF2BPO75031 334 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 HMGB1P09429 215 aaKnown RBP13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 PRPF31Q8WWY3 499 aaKnown RBP13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 TNNI2P48788 182 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 CCDC25Q86WR0 208 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 PAGR1Q9BTK6 254 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 GTF2F1P35269 517 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■■□□□ 13.3
TRIOBP-202ENST00000344404 CCDC183Q5T5S1 534 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 RPAP2Q8IXW5 612 aaPredicted RBP13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 RNF169Q8NCN4 708 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 SPAG5Q96R06 1193 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 CUL4BQ13620 913 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 IVNS1ABPQ9Y6Y0 642 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 PLEKHH2Q8IVE3 1493 aa13.9□□□□□ -0.18
TRIOBP-202ENST00000344404 KLF18A0A0U1RQI7 1052 aa13.9□□□□□ -0.19
TRIOBP-202ENST00000344404 KIF4AO95239 1232 aa13.9□□□□□ -0.19
TRIOBP-202ENST00000344404 KIF18AQ8NI77 898 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 N4BP3O15049 544 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 ZNF710Q8N1W2 664 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 TTLL3Q9Y4R7 772 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 CCDC114Q96M63 670 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 ABL1P00519 1130 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 SSFA2P28290 1259 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 MCM7P33993 719 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 C6orf50Q9HD87 102 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 HCLS1P14317 486 aaPredicted RBP13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 DCAF17Q5H9S7 520 aaPredicted RBP13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 FAM114A1Q8IWE2 563 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 CNBD1Q8NA66 436 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 PPP1R9BQ96SB3 815 aa13.89□□□□□ -0.19
TRIOBP-202ENST00000344404 ASIC1P78348 528 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 GADL1Q6ZQY3 521 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 CPXCR1Q8N123 301 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 TRIM6Q9C030 488 aaPredicted RBP13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 USH1GQ495M9 461 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 NAA25Q14CX7 972 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 NEK1Q96PY6 1258 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 CFAP157Q5JU67 520 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 FCHSD1Q86WN1 690 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 GPIHBP1Q8IV16 184 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 KIAA1107Q9UPP5 1409 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 TNRQ92752 1358 aa13.88□□□□□ -0.19
TRIOBP-202ENST00000344404 AKR1B10O60218 316 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 LPXNO60711 386 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 CAPZA3Q96KX2 299 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 ABT1Q9ULW3 272 aaKnown RBP13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 CASKIN1Q8WXD9 1431 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 NOP56O00567 594 aaKnown RBP13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 CKAP4Q07065 602 aaKnown RBP13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 PPANQ9NQ55 473 aaKnown RBP13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 GAS8O95995 478 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 LDHBP07195 334 aaKnown RBP13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 RTN1Q16799 776 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 ALG1Q9BT22 464 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 PA2G4Q9UQ80 394 aaKnown RBP13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 CEP83Q9Y592 693 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 NOS1P29475 1434 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 BAG6P46379 1132 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 GMNNO75496 209 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 ERCC3P19447 782 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 DHX58Q96C10 678 aa13.87□□□□□ -0.19
TRIOBP-202ENST00000344404 TTC12Q9H892 705 aaPredicted RBP13.86□□□□□ -0.19
TRIOBP-202ENST00000344404 ZGPATQ8N5A5 531 aaKnown RBP13.86□□□□□ -0.19
TRIOBP-202ENST00000344404 C20orf194Q5TEA3 1177 aa13.86□□□□□ -0.19
TRIOBP-202ENST00000344404 ZNF830Q96NB3 372 aaPredicted RBP13.86□□□□□ -0.19
TRIOBP-202ENST00000344404 NOL3O60936 208 aaKnown RBP13.86□□□□□ -0.19
TRIOBP-202ENST00000344404 LIMCH1Q9UPQ0 1083 aa13.86□□□□□ -0.19
TRIOBP-202ENST00000344404 CCDC169A6NNP5 214 aa13.86□□□□□ -0.19
TRIOBP-202ENST00000344404 ZBTB43O43298 467 aa13.86□□□□□ -0.19
TRIOBP-202ENST00000344404 SEPT14Q6ZU15 432 aa13.86□□□□□ -0.19
TRIOBP-202ENST00000344404 KIFC2Q96AC6 838 aa13.85□□□□□ -0.19
TRIOBP-202ENST00000344404 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
TRIOBP-202ENST00000344404 TTC30AQ86WT1 665 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms