RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 BRD2P25440 801 aaKnown RBP6.96□□□□□ -1.3
CSMD1-201ENST00000335551 TRIM14Q14142 442 aa6.96□□□□□ -1.3
CSMD1-201ENST00000335551 BMP2KLQ5H9B9 411 aa6.96□□□□□ -1.3
CSMD1-201ENST00000335551 IQCA1Q86XH1 822 aa6.96□□□□□ -1.3
CSMD1-201ENST00000335551 DRC3Q9H069 523 aa6.96□□□□□ -1.3
CSMD1-201ENST00000335551 RBM27Q9P2N5 1060 aaKnown RBP6.96□□□□□ -1.3
CSMD1-201ENST00000335551 EFCAB5A4FU69 1503 aa6.96□□□□□ -1.3
CSMD1-201ENST00000335551 ZSCAN22P10073 491 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-201ENST00000335551 CCDC25Q86WR0 208 aa6.96□□□□□ -1.3
CSMD1-201ENST00000335551 RTL1A6NKG5 1358 aa6.96□□□□□ -1.3
CSMD1-201ENST00000335551 MYRIPQ8NFW9 859 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.95□□□□□ -1.3
CSMD1-201ENST00000335551 STAT6P42226 847 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 LRRC43Q8N309 656 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 SMIM23A6NLE4 172 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 SRGAP1Q7Z6B7 1085 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 GABPB2Q8TAK5 448 aaPredicted RBP6.95□□□□□ -1.3
CSMD1-201ENST00000335551 ATP6V0A2Q9Y487 856 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 LRRD1A4D1F6 860 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 EVCP57679 992 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 FAM69CQ0P6D2 419 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 MRPS27Q92552 414 aaKnown RBP6.95□□□□□ -1.3
CSMD1-201ENST00000335551 SYNJ2O15056 1496 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 TAF7Q15545 349 aaPredicted RBP6.95□□□□□ -1.3
CSMD1-201ENST00000335551 ALDH1L2Q3SY69 923 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 CYB5RLQ6IPT4 315 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 BICDL1Q6ZP65 573 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 EEF2P13639 858 aaKnown RBP6.95□□□□□ -1.3
CSMD1-201ENST00000335551 CCDC186Q7Z3E2 898 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 NEK11Q8NG66 645 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 OPHN1O60890 802 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 WDR78Q5VTH9 848 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 KAT6AQ92794 2004 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 C8orf74Q6P047 294 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 STAG1Q8WVM7 1258 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 RGS22Q8NE09 1264 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 NLRP2Q9NX02 1062 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 PPP1R9AQ9ULJ8 1098 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 UBL4BQ8N7F7 174 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 GUCA1BQ9UMX6 200 aa6.95□□□□□ -1.3
CSMD1-201ENST00000335551 MYH9P35579 1960 aaKnown RBP6.94□□□□□ -1.3
CSMD1-201ENST00000335551 ERBINQ96RT1 1412 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 RRAGBQ5VZM2 374 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 GOLGA5Q8TBA6 731 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 NAPGQ99747 312 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-201ENST00000335551 RIPOR2Q9Y4F9 1068 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 EHBP1L1Q8N3D4 1523 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 EVI5O60447 810 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 SEPT8Q92599 483 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 MED4Q9NPJ6 270 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 ZSCAN26Q16670 478 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 ZNF569Q5MCW4 686 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 VSIG1Q86XK7 387 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 ZNF830Q96NB3 372 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-201ENST00000335551 INPP1P49441 399 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 LRRC23Q53EV4 343 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-201ENST00000335551 VEZTQ9HBM0 779 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 SATB2Q9UPW6 733 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 RAD50Q92878 1312 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 IGHMBP2P38935 993 aaKnown RBP6.94□□□□□ -1.3
CSMD1-201ENST00000335551 GIMAP6Q6P9H5 292 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 TMOD2Q9NZR1 351 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 CCDC65Q8IXS2 484 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 PRPF31Q8WWY3 499 aaKnown RBP6.94□□□□□ -1.3
CSMD1-201ENST00000335551 DAPK1P53355 1430 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 TXNDC9O14530 226 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 SMIM24O75264 130 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 TRIM68Q6AZZ1 485 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 MORC4Q8TE76 937 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 RSPH3Q86UC2 560 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 MAK16Q9BXY0 300 aaKnown RBP6.94□□□□□ -1.3
CSMD1-201ENST00000335551 CEP104O60308 925 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 UBXN1Q04323 297 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 DENND2CQ68D51 928 aa6.94□□□□□ -1.3
CSMD1-201ENST00000335551 UTP14AQ9BVJ6 771 aaKnown RBP6.94□□□□□ -1.3
CSMD1-201ENST00000335551 IDH1O75874 414 aaKnown RBP6.93□□□□□ -1.3
CSMD1-201ENST00000335551 IDEP14735 1019 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 GEN1Q17RS7 908 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 SLF2Q8IX21 1173 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 CXorf38Q8TB03 319 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 LZTFL1Q9NQ48 299 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 ZC3H6P61129 1189 aaKnown RBP6.93□□□□□ -1.3
CSMD1-201ENST00000335551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
CSMD1-201ENST00000335551 AOPEPQ8N6M6 819 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 IMPG2Q9BZV3 1241 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 FAM169AQ9Y6X4 670 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 GRIN2BQ13224 1484 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 RBM5P52756 815 aaKnown RBP eCLIP6.93□□□□□ -1.3
CSMD1-201ENST00000335551 CCDC122Q5T0U0 273 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 RPGRIP1Q96KN7 1286 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 TTF2Q9UNY4 1162 aaKnown RBP6.93□□□□□ -1.3
CSMD1-201ENST00000335551 CAPN7Q9Y6W3 813 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 CCDC141Q6ZP82 1450 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 HFM1A2PYH4 1435 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 POGZQ7Z3K3 1410 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 PEX19P40855 299 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 DIXDC1Q155Q3 683 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 AMOTQ4VCS5 1084 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 CABS1Q96KC9 395 aa6.93□□□□□ -1.3
CSMD1-201ENST00000335551 TSKSQ9UJT2 592 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms