RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 UBE4AQ14139 1066 aa22.85■■□□□ 1.25
EXOSC3-201ENST00000327304 LTBP1Q14766 1721 aa22.85■■□□□ 1.25
EXOSC3-201ENST00000327304 KCNJ4P48050 445 aa22.85■■□□□ 1.25
EXOSC3-201ENST00000327304 TTLL6Q8N841 843 aa22.85■■□□□ 1.25
EXOSC3-201ENST00000327304 ZNF219Q9P2Y4 722 aaPredicted RBP22.85■■□□□ 1.25
EXOSC3-201ENST00000327304 NSFL1CQ9UNZ2 370 aaKnown RBP22.85■■□□□ 1.25
EXOSC3-201ENST00000327304 IFIT1P09914 478 aaKnown RBP22.84■■□□□ 1.25
EXOSC3-201ENST00000327304 SDSP20132 328 aa22.84■■□□□ 1.25
EXOSC3-201ENST00000327304 ERICH6Q7L0X2 663 aa22.84■■□□□ 1.25
EXOSC3-201ENST00000327304 C22orf23Q9BZE7 217 aa22.84■■□□□ 1.25
EXOSC3-201ENST00000327304 ZNF804BA4D1E1 1349 aa22.84■■□□□ 1.25
EXOSC3-201ENST00000327304 KLRK1P26718 216 aa22.83■■□□□ 1.25
EXOSC3-201ENST00000327304 GORABQ5T7V8 394 aa22.83■■□□□ 1.25
EXOSC3-201ENST00000327304 C7orf43Q8WVR3 580 aa22.83■■□□□ 1.25
EXOSC3-201ENST00000327304 PODXL2Q9NZ53 605 aa22.83■■□□□ 1.25
EXOSC3-201ENST00000327304 NLGN2Q8NFZ4 835 aa22.82■■□□□ 1.24
EXOSC3-201ENST00000327304 WWC3Q9ULE0 1092 aa22.82■■□□□ 1.24
EXOSC3-201ENST00000327304 LEMD3Q9Y2U8 911 aa22.82■■□□□ 1.24
EXOSC3-201ENST00000327304 BRCA1P38398 1863 aaKnown RBP22.82■■□□□ 1.24
EXOSC3-201ENST00000327304 UFL1O94874 794 aa22.82■■□□□ 1.24
EXOSC3-201ENST00000327304 GPR101Q96P66 508 aaPredicted RBP22.82■■□□□ 1.24
EXOSC3-201ENST00000327304 PIM2Q9P1W9 311 aa22.82■■□□□ 1.24
EXOSC3-201ENST00000327304 DUOX1Q9NRD9 1551 aa22.81■■□□□ 1.24
EXOSC3-201ENST00000327304 ERC2O15083 957 aa22.81■■□□□ 1.24
EXOSC3-201ENST00000327304 GLRX3O76003 335 aaKnown RBP22.81■■□□□ 1.24
EXOSC3-201ENST00000327304 PHKA1P46020 1223 aa22.81■■□□□ 1.24
EXOSC3-201ENST00000327304 GGA1Q9UJY5 639 aa22.81■■□□□ 1.24
EXOSC3-201ENST00000327304 ATP5JP18859 108 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 CASC1Q6TDU7 716 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 TBC1D16Q8TBP0 767 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 POLLQ9UGP5 575 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 IRS2Q9Y4H2 1338 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 C21orf2O43822 256 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 ATP2B4P23634 1241 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 RBM25P49756 843 aaKnown RBP22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 CCDC158Q5M9N0 1113 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 TTC39AQ5SRH9 613 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 CCDC102BQ68D86 513 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 MPNDQ8N594 471 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 TMX4Q9H1E5 349 aaPredicted RBP22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 BOLA2Q9H3K6 86 aa22.8■■□□□ 1.24
EXOSC3-201ENST00000327304 MAP4K4O95819 1239 aaPredicted RBP22.79■■□□□ 1.24
EXOSC3-201ENST00000327304 GYG1P46976 350 aa22.79■■□□□ 1.24
EXOSC3-201ENST00000327304 BCAMP50895 628 aa22.79■■□□□ 1.24
EXOSC3-201ENST00000327304 TXNRD3Q86VQ6 643 aa22.79■■□□□ 1.24
EXOSC3-201ENST00000327304 FHDC1Q9C0D6 1143 aaPredicted RBP22.79■■□□□ 1.24
EXOSC3-201ENST00000327304 SNED1Q8TER0 1413 aa22.78■■□□□ 1.24
EXOSC3-201ENST00000327304 DPP8Q6V1X1 898 aaPredicted RBP22.78■■□□□ 1.24
EXOSC3-201ENST00000327304 SCARF1Q14162 830 aa22.78■■□□□ 1.24
EXOSC3-201ENST00000327304 DALRD3Q5D0E6 543 aaKnown RBP22.78■■□□□ 1.24
EXOSC3-201ENST00000327304 FAM84BQ96KN1 310 aaPredicted RBP22.78■■□□□ 1.24
EXOSC3-201ENST00000327304 NDUFB9Q9Y6M9 179 aa22.78■■□□□ 1.24
EXOSC3-201ENST00000327304 C6orf229H3BNL8 230 aa22.77■■□□□ 1.24
EXOSC3-201ENST00000327304 DAXXQ9UER7 740 aaPredicted RBP22.77■■□□□ 1.24
EXOSC3-201ENST00000327304 ARID4AP29374 1257 aaPredicted RBP22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 CC2D2BQ6DHV5 1058 aa22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 C15orf52Q6ZUT6 534 aaKnown RBP22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 FBXO33Q7Z6M2 555 aa22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 HAUS7Q99871 368 aa22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 MCAMP43121 646 aa22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 BECN1Q14457 450 aa22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 CAVIN4Q5BKX8 364 aa22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 PI16Q6UXB8 463 aa22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 EDC3Q96F86 508 aaKnown RBP22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 ZNF512BQ96KM6 892 aaPredicted RBP22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 SNRKQ9NRH2 765 aa22.75■■□□□ 1.23
EXOSC3-201ENST00000327304 TRIM6-TRIM34B2RNG4 842 aa22.74■■□□□ 1.23
EXOSC3-201ENST00000327304 UQCRFS1P1P0C7P4 283 aa22.74■■□□□ 1.23
EXOSC3-201ENST00000327304 CCDC93Q567U6 631 aa22.74■■□□□ 1.23
EXOSC3-201ENST00000327304 DNAJC2Q99543 621 aaKnown RBP22.74■■□□□ 1.23
EXOSC3-201ENST00000327304 MED23Q9ULK4 1368 aa22.74■■□□□ 1.23
EXOSC3-201ENST00000327304 AKAP11Q9UKA4 1901 aa22.73■■□□□ 1.23
EXOSC3-201ENST00000327304 HIBADHP31937 336 aaKnown RBP22.73■■□□□ 1.23
EXOSC3-201ENST00000327304 VPS37DQ86XT2 251 aa22.73■■□□□ 1.23
EXOSC3-201ENST00000327304 IQSEC3Q9UPP2 1182 aaPredicted RBP22.73■■□□□ 1.23
EXOSC3-201ENST00000327304 GOLGB1Q14789 3259 aaKnown RBP22.73■■□□□ 1.23
EXOSC3-201ENST00000327304 RASGRF1Q13972 1273 aa22.73■■□□□ 1.23
EXOSC3-201ENST00000327304 RILPL2Q969X0 211 aa22.73■■□□□ 1.23
EXOSC3-201ENST00000327304 BCS1LQ9Y276 419 aa22.73■■□□□ 1.23
EXOSC3-201ENST00000327304 RTFDC1Q9BY42 306 aaPredicted RBP22.72■■□□□ 1.23
EXOSC3-201ENST00000327304 COL1A1P02452 1464 aaPredicted RBP22.71■■□□□ 1.23
EXOSC3-201ENST00000327304 RIMBP2O15034 1052 aa22.71■■□□□ 1.23
EXOSC3-201ENST00000327304 SYT17Q9BSW7 474 aa22.71■■□□□ 1.23
EXOSC3-201ENST00000327304 HMG20BQ9P0W2 317 aa22.71■■□□□ 1.23
EXOSC3-201ENST00000327304 SRCAPQ6ZRS2 3230 aa22.71■■□□□ 1.23
EXOSC3-201ENST00000327304 ZAP70P43403 619 aa22.71■■□□□ 1.23
EXOSC3-201ENST00000327304 FKBP4Q02790 459 aaKnown RBP eCLIP22.71■■□□□ 1.23
EXOSC3-201ENST00000327304 GNL3LQ9NVN8 582 aaKnown RBP22.71■■□□□ 1.23
EXOSC3-201ENST00000327304 GOLIM4O00461 696 aa22.7■■□□□ 1.22
EXOSC3-201ENST00000327304 ZNF804AQ7Z570 1209 aa22.7■■□□□ 1.22
EXOSC3-201ENST00000327304 RTKN2Q8IZC4 609 aa22.7■■□□□ 1.22
EXOSC3-201ENST00000327304 CNTROBQ8N137 903 aa22.7■■□□□ 1.22
EXOSC3-201ENST00000327304 PAG1Q9NWQ8 432 aa22.7■■□□□ 1.22
EXOSC3-201ENST00000327304 AK9Q5TCS8 1911 aa22.7■■□□□ 1.22
EXOSC3-201ENST00000327304 WASHC4Q2M389 1173 aa22.69■■□□□ 1.22
EXOSC3-201ENST00000327304 GRIPAP1Q4V328 841 aa22.69■■□□□ 1.22
EXOSC3-201ENST00000327304 SOGA3Q5TF21 947 aa22.69■■□□□ 1.22
EXOSC3-201ENST00000327304 SPATA5Q8NB90 893 aa22.69■■□□□ 1.22
EXOSC3-201ENST00000327304 EVI5LQ96CN4 794 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms