RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
ABCF1-201ENST00000326195 SPTLC3Q9NUV7 552 aa12.28□□□□□ -0.44
ABCF1-201ENST00000326195 BTAF1O14981 1849 aa12.27□□□□□ -0.44
ABCF1-201ENST00000326195 BRPF1P55201 1214 aaPredicted RBP12.27□□□□□ -0.44
ABCF1-201ENST00000326195 ATP8B2P98198 1209 aa12.27□□□□□ -0.44
ABCF1-201ENST00000326195 NLGN1Q8N2Q7 840 aa12.27□□□□□ -0.44
ABCF1-201ENST00000326195 ANKRD44Q8N8A2 993 aa12.27□□□□□ -0.44
ABCF1-201ENST00000326195 DCTPP1Q9H773 170 aa12.27□□□□□ -0.44
ABCF1-201ENST00000326195 ERVV-1B6SEH8 477 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 GADD45BO75293 160 aaPredicted RBP12.27□□□□□ -0.45
ABCF1-201ENST00000326195 AACSQ86V21 672 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 ANKIB1Q9P2G1 1089 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 PYCARDQ9ULZ3 195 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 H7C1W4 665 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 ADCY5O95622 1261 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 ST5P78524 1137 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 TFCP2Q12800 502 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 TTC22Q5TAA0 569 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 CERS3Q8IU89 383 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 PLEKHM2Q8IWE5 1019 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 TTLL11Q8NHH1 800 aa12.27□□□□□ -0.45
ABCF1-201ENST00000326195 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
ABCF1-201ENST00000326195 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
ABCF1-201ENST00000326195 ANKRD18BA2A2Z9 1011 aa12.26□□□□□ -0.45
ABCF1-201ENST00000326195 CTSWP56202 376 aa12.26□□□□□ -0.45
ABCF1-201ENST00000326195 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
ABCF1-201ENST00000326195 NTSR2O95665 410 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 PCCAP05165 728 aaPredicted RBP12.25□□□□□ -0.45
ABCF1-201ENST00000326195 KCNF1Q9H3M0 494 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 C5P01031 1676 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 ERC2O15083 957 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 PDE8AO60658 829 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 NEK4P51957 841 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 FOXO4P98177 505 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 USP26Q9BXU7 913 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 ABCC12Q96J65 1359 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 AP5Z1O43299 807 aa12.25□□□□□ -0.45
ABCF1-201ENST00000326195 C6orf229H3BNL8 230 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 IFIT2P09913 472 aaKnown RBP12.24□□□□□ -0.45
ABCF1-201ENST00000326195 SDSP20132 328 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 CDK11BP21127 795 aaKnown RBP12.24□□□□□ -0.45
ABCF1-201ENST00000326195 NCBP1Q09161 790 aaKnown RBP12.24□□□□□ -0.45
ABCF1-201ENST00000326195 PARP10Q53GL7 1025 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 TAF3Q5VWG9 929 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 DNAJC2Q99543 621 aaKnown RBP12.24□□□□□ -0.45
ABCF1-201ENST00000326195 TLR7Q9NYK1 1049 aaKnown RBP12.24□□□□□ -0.45
ABCF1-201ENST00000326195 CTIFO43310 598 aaKnown RBP12.24□□□□□ -0.45
ABCF1-201ENST00000326195 IGHMBP2P38935 993 aaKnown RBP12.24□□□□□ -0.45
ABCF1-201ENST00000326195 CCDC152Q4G0S7 254 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 C2CD5Q86YS7 1000 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
ABCF1-201ENST00000326195 CARMIL3Q8ND23 1372 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 CAPN2P17655 700 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 POLD1P28340 1107 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 LRRCC1Q9C099 1032 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 BOLA2Q9H3K6 86 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 OGFRQ9NZT2 677 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 CEP126Q9P2H0 1117 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 CTNNA3Q9UI47 895 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
ABCF1-201ENST00000326195 CLEC4GQ6UXB4 293 aa12.23□□□□□ -0.45
ABCF1-201ENST00000326195 RHPN1Q8TCX5 695 aa12.23□□□□□ -0.45
ABCF1-201ENST00000326195 G3V3G9 751 aa12.23□□□□□ -0.45
ABCF1-201ENST00000326195 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
ABCF1-201ENST00000326195 PLCB2Q00722 1185 aa12.23□□□□□ -0.45
ABCF1-201ENST00000326195 FKBP4Q02790 459 aaKnown RBP eCLIP12.23□□□□□ -0.45
ABCF1-201ENST00000326195 PTPN12Q05209 780 aaKnown RBP12.23□□□□□ -0.45
ABCF1-201ENST00000326195 DCAF8Q5TAQ9 597 aa12.23□□□□□ -0.45
ABCF1-201ENST00000326195 VPS37DQ86XT2 251 aa12.23□□□□□ -0.45
ABCF1-201ENST00000326195 ANKRD18AQ8IVF6 992 aa12.23□□□□□ -0.45
ABCF1-201ENST00000326195 KIAA1524Q8TCG1 905 aa12.23□□□□□ -0.45
ABCF1-201ENST00000326195 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
ABCF1-201ENST00000326195 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
ABCF1-201ENST00000326195 CLASRPQ8N2M8 674 aaKnown RBP12.22□□□□□ -0.45
ABCF1-201ENST00000326195 NYXQ9GZU5 481 aa12.22□□□□□ -0.45
ABCF1-201ENST00000326195 CWC22Q9HCG8 908 aaKnown RBP12.22□□□□□ -0.45
ABCF1-201ENST00000326195 ZBTB9Q96C00 473 aa12.22□□□□□ -0.45
ABCF1-201ENST00000326195 C21orf2O43822 256 aa12.21□□□□□ -0.45
ABCF1-201ENST00000326195 ADORA1P30542 326 aa12.21□□□□□ -0.45
ABCF1-201ENST00000326195 PI16Q6UXB8 463 aa12.21□□□□□ -0.45
ABCF1-201ENST00000326195 FEZ1Q99689 392 aa12.21□□□□□ -0.45
ABCF1-201ENST00000326195 KDM3BQ7LBC6 1761 aa12.21□□□□□ -0.45
ABCF1-201ENST00000326195 ADRA2BP18089 450 aa12.21□□□□□ -0.45
ABCF1-201ENST00000326195 RPS8P62241 208 aaKnown RBP12.21□□□□□ -0.45
ABCF1-201ENST00000326195 DBNDD2Q9BQY9 259 aa12.21□□□□□ -0.45
ABCF1-201ENST00000326195 ERICH4A6NGS2 130 aa12.21□□□□□ -0.46
ABCF1-201ENST00000326195 CASP7P55210 303 aa12.21□□□□□ -0.46
ABCF1-201ENST00000326195 FLAD1Q8NFF5 587 aa12.21□□□□□ -0.46
ABCF1-201ENST00000326195 HDAC5Q9UQL6 1122 aa12.21□□□□□ -0.46
ABCF1-201ENST00000326195 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.21□□□□□ -0.46
ABCF1-201ENST00000326195 SASH1O94885 1247 aa12.2□□□□□ -0.46
ABCF1-201ENST00000326195 SPC24Q8NBT2 197 aa12.2□□□□□ -0.46
ABCF1-201ENST00000326195 ST7Q9NRC1 585 aa12.2□□□□□ -0.46
ABCF1-201ENST00000326195 H0YIN7 160 aa12.2□□□□□ -0.46
ABCF1-201ENST00000326195 MBD3O95983 291 aa12.2□□□□□ -0.46
ABCF1-201ENST00000326195 TERF2Q15554 542 aa12.2□□□□□ -0.46
ABCF1-201ENST00000326195 SLFNL1Q499Z3 407 aa12.2□□□□□ -0.46
ABCF1-201ENST00000326195 EAF2Q96CJ1 260 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-201ENST00000326195 TMX4Q9H1E5 349 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-201ENST00000326195 GYG1P46976 350 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms