RNA–Protein interactions for RNA: ENST00000314891.10

LPCAT4-201, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT4, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-201ENST00000314891 HMGB1P09429 215 aaKnown RBP25.04■■□□□ 1.6
LPCAT4-201ENST00000314891 FGD1P98174 961 aa25.04■■□□□ 1.6
LPCAT4-201ENST00000314891 TTC6Q86TZ1 520 aa25.04■■□□□ 1.6
LPCAT4-201ENST00000314891 ADAMTS2O95450 1211 aa25.03■■□□□ 1.6
LPCAT4-201ENST00000314891 PDIA4P13667 645 aaKnown RBP25.03■■□□□ 1.6
LPCAT4-201ENST00000314891 EXOSC10Q01780 885 aaKnown RBP25.03■■□□□ 1.6
LPCAT4-201ENST00000314891 CSPP1Q1MSJ5 1256 aa25.03■■□□□ 1.6
LPCAT4-201ENST00000314891 ANKRD18BA2A2Z9 1011 aa25.03■■□□□ 1.6
LPCAT4-201ENST00000314891 IL6STP40189 918 aaPredicted RBP25.03■■□□□ 1.6
LPCAT4-201ENST00000314891 WASHC4Q2M389 1173 aa25.03■■□□□ 1.6
LPCAT4-201ENST00000314891 APOBRQ0VD83 1088 aa25.02■■□□□ 1.6
LPCAT4-201ENST00000314891 CHST3Q7LGC8 479 aa25.02■■□□□ 1.6
LPCAT4-201ENST00000314891 DDX11Q96FC9 970 aa25.02■■□□□ 1.6
LPCAT4-201ENST00000314891 CNNM1Q9NRU3 951 aa25.02■■□□□ 1.6
LPCAT4-201ENST00000314891 NRAPQ86VF7 1730 aa25.02■■□□□ 1.6
LPCAT4-201ENST00000314891 MCAMP43121 646 aa25.02■■□□□ 1.6
LPCAT4-201ENST00000314891 KRT85P78386 507 aa25.02■■□□□ 1.6
LPCAT4-201ENST00000314891 VGLL2Q8N8G2 317 aa25.02■■□□□ 1.6
LPCAT4-201ENST00000314891 A0A0G2JS52 829 aa25.01■■□□□ 1.59
LPCAT4-201ENST00000314891 PUS7LQ9H0K6 701 aaKnown RBP25.01■■□□□ 1.59
LPCAT4-201ENST00000314891 ERVV-1B6SEH8 477 aa25.01■■□□□ 1.59
LPCAT4-201ENST00000314891 AGXT2Q9BYV1 514 aa25.01■■□□□ 1.59
LPCAT4-201ENST00000314891 PDE8AO60658 829 aa25■■□□□ 1.59
LPCAT4-201ENST00000314891 PFKFB2O60825 505 aa25■■□□□ 1.59
LPCAT4-201ENST00000314891 ZNF34Q8IZ26 560 aa25■■□□□ 1.59
LPCAT4-201ENST00000314891 SPATA31A1Q5TZJ5 1347 aa25■■□□□ 1.59
LPCAT4-201ENST00000314891 ACSBG1Q96GR2 724 aa25■■□□□ 1.59
LPCAT4-201ENST00000314891 MYH14Q7Z406 1995 aaKnown RBP24.99■■□□□ 1.59
LPCAT4-201ENST00000314891 TFIP11Q9UBB9 837 aaKnown RBP24.99■■□□□ 1.59
LPCAT4-201ENST00000314891 CTDNEP1O95476 244 aa24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 ZFYP08048 801 aaPredicted RBP24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 HAND2P61296 217 aa24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 SMARCC2Q8TAQ2 1214 aa24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 MYH15Q9Y2K3 1946 aa24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 ABCC12Q96J65 1359 aa24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 DDB1Q16531 1140 aa24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 LRRFIP1Q32MZ4 808 aaKnown RBP24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 INTS5Q6P9B9 1019 aaKnown RBP24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 APPBP2Q92624 585 aa24.98■■□□□ 1.59
LPCAT4-201ENST00000314891 EIF5P55010 431 aaKnown RBP24.97■■□□□ 1.59
LPCAT4-201ENST00000314891 GIMAP6Q6P9H5 292 aa24.97■■□□□ 1.59
LPCAT4-201ENST00000314891 NSUN7Q8NE18 718 aaKnown RBP24.97■■□□□ 1.59
LPCAT4-201ENST00000314891 CCT2P78371 535 aaKnown RBP24.97■■□□□ 1.59
LPCAT4-201ENST00000314891 ELP1O95163 1332 aa24.96■■□□□ 1.59
LPCAT4-201ENST00000314891 LETM1O95202 739 aaPredicted RBP24.96■■□□□ 1.59
LPCAT4-201ENST00000314891 PDE8BO95263 885 aa24.96■■□□□ 1.59
LPCAT4-201ENST00000314891 FGAP02671 866 aa24.96■■□□□ 1.59
LPCAT4-201ENST00000314891 ZSCAN30Q86W11 494 aa24.96■■□□□ 1.59
LPCAT4-201ENST00000314891 NCOA5Q9HCD5 579 aaKnown RBP24.96■■□□□ 1.59
LPCAT4-201ENST00000314891 PHLPP1O60346 1717 aa24.96■■□□□ 1.59
LPCAT4-201ENST00000314891 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.96■■□□□ 1.59
LPCAT4-201ENST00000314891 LRP5O75197 1615 aa24.95■■□□□ 1.59
LPCAT4-201ENST00000314891 FAM177BA6PVY3 158 aa24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 HCLS1P14317 486 aaPredicted RBP24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 RESTQ13127 1097 aa24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 SUSD4Q5VX71 490 aa24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 MARCH10Q8NA82 808 aaPredicted RBP24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 LLPHQ9BRT6 129 aaKnown RBP24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 GPHNQ9NQX3 736 aaPredicted RBP24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 GPAA1O43292 621 aa24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 PPFIA3O75145 1194 aa24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 ATP6V1AP38606 617 aa24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 CRKLP46109 303 aaKnown RBP24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 FAM184AQ8NB25 1140 aa24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 HELBQ8NG08 1087 aaPredicted RBP24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 FUCA2Q9BTY2 467 aa24.95■■□□□ 1.58
LPCAT4-201ENST00000314891 PHKA1P46020 1223 aa24.94■■□□□ 1.58
LPCAT4-201ENST00000314891 CCDC87Q9NVE4 849 aa24.94■■□□□ 1.58
LPCAT4-201ENST00000314891 NAP1L2Q9ULW6 460 aaPredicted RBP24.94■■□□□ 1.58
LPCAT4-201ENST00000314891 PTPDC1A2A3K4 754 aa24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 H3BQV1 296 aa24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 LIG1P18858 919 aa24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 PDIA3P30101 505 aaKnown RBP24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 FOSBP53539 338 aa24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 IFFO2Q5TF58 517 aa24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 SPATA32Q96LK8 384 aa24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 CDCA7Q9BWT1 371 aaPredicted RBP24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 SCAND2PQ9GZW5 306 aaPredicted RBP24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 PIH1D3Q9NQM4 214 aaKnown RBP24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 CTNNA3Q9UI47 895 aa24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 ARAP2Q8WZ64 1704 aa24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 DDX60Q8IY21 1712 aaKnown RBP24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 IMMTQ16891 758 aaKnown RBP24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 CCDC102BQ68D86 513 aa24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 LEO1Q8WVC0 666 aaPredicted RBP24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 ZNF512BQ96KM6 892 aaPredicted RBP24.93■■□□□ 1.58
LPCAT4-201ENST00000314891 ITPK1Q13572 414 aa24.92■■□□□ 1.58
LPCAT4-201ENST00000314891 ADD2P35612 726 aa24.92■■□□□ 1.58
LPCAT4-201ENST00000314891 HS1BP3Q53T59 392 aa24.92■■□□□ 1.58
LPCAT4-201ENST00000314891 SLC9C2Q5TAH2 1124 aa24.92■■□□□ 1.58
LPCAT4-201ENST00000314891 RREB1Q92766 1687 aa24.91■■□□□ 1.58
LPCAT4-201ENST00000314891 LOC102724428A0A0B4J2F2 783 aa24.91■■□□□ 1.58
LPCAT4-201ENST00000314891 SIK1P57059 783 aa24.91■■□□□ 1.58
LPCAT4-201ENST00000314891 ZNF274Q96GC6 653 aaPredicted RBP24.91■■□□□ 1.58
LPCAT4-201ENST00000314891 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.91■■□□□ 1.584e-7■■■■■ 34.7
LPCAT4-201ENST00000314891 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.91■■□□□ 1.58
LPCAT4-201ENST00000314891 THRAP3Q9Y2W1 955 aaKnown RBP24.91■■□□□ 1.58
LPCAT4-201ENST00000314891 SALL1Q9NSC2 1324 aa24.91■■□□□ 1.58
LPCAT4-201ENST00000314891 SNAP23O00161 211 aa24.91■■□□□ 1.58
LPCAT4-201ENST00000314891 NUTM2BA6NNL0 878 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms