RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 NMIQ13287 307 aaPredicted RBP12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 TCERG1LQ5VWI1 586 aa12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 BACH2Q9BYV9 841 aa12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 CDC42BPAQ5VT25 1732 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 A0A1B0GUL7 405 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 VAMP4O75379 141 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 NBPF7P0C2Y1 421 aaPredicted RBP12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 C6orf50Q9HD87 102 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 MAGI3Q5TCQ9 1506 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 CETN1Q12798 172 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 RTL9Q8NET4 1388 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 CCDC97Q96F63 343 aaPredicted RBP12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 ERVK-7P63135 1459 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 LOC102724428A0A0B4J2F2 783 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 SIK1P57059 783 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 ANKRD44Q8N8A2 993 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 CSADQ9Y600 493 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 MBD4O95243 580 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 PANK2Q9BZ23 570 aa12.31□□□□□ -0.44
SYNPO2-201ENST00000307142 USP8P40818 1118 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 TIMM10P62072 90 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 CARD10Q9BWT7 1032 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 ZNF496Q96IT1 587 aaPredicted RBP12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 ACBD3Q9H3P7 528 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 RBM8AQ9Y5S9 174 aaKnown RBP12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 PARP1P09874 1014 aaKnown RBP12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 NUCB1Q02818 461 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 MAP3K11Q16584 847 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 CFAP100Q494V2 611 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 Q6ZUG5 572 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 SKAP1Q86WV1 359 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 NLGN1Q8N2Q7 840 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 SMCR8Q8TEV9 937 aaPredicted RBP12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 ALG1Q9BT22 464 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 SEPT7Q16181 437 aaKnown RBP12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 ARGLU1Q9NWB6 273 aaPredicted RBP12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 RIMBP3CA6NJZ7 1639 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 RIMBP3BA6NNM3 1639 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 RIMBP3Q9UFD9 1639 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 SDSP20132 328 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 GTF2IP78347 998 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 G2E3Q7L622 706 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 ZKSCAN3Q9BRR0 538 aa12.3□□□□□ -0.44
SYNPO2-201ENST00000307142 FAM212AQ96EL1 285 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 GOPCQ9HD26 462 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 AFF2P51816 1311 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 PDE1AP54750 535 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 XAGE2Q96GT9 111 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 CRKLP46109 303 aaKnown RBP12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 KCNQ4P56696 695 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 USPL1Q5W0Q7 1092 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 MROH5Q6ZUA9 1318 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 BACH1O14867 736 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 PRC1O43663 620 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 PRKCSHP14314 528 aaPredicted RBP12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 JAKMIP3Q5VZ66 844 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 CETN2P41208 172 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 KIF22Q14807 665 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 BRF1Q92994 677 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
SYNPO2-201ENST00000307142 EYA2O00167 538 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 LRRC27Q9C0I9 530 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 ARMT1Q9H993 441 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 CTSWP56202 376 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 CCDC40Q4G0X9 1142 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 SULF1Q8IWU6 871 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 SCAND2PQ9GZW5 306 aaPredicted RBP12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 ANAPC15P60006 121 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 PARD3Q8TEW0 1356 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 EPB41L2O43491 1005 aaKnown RBP12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 BRDTQ58F21 947 aaPredicted RBP12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 EXOC1Q9NV70 894 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 TCHPQ9BT92 498 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 TTF2Q9UNY4 1162 aaKnown RBP12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 PHACTR2O75167 634 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 CEP85Q6P2H3 762 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 VPS36Q86VN1 386 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 FSIP1Q8NA03 581 aa12.28□□□□□ -0.44
SYNPO2-201ENST00000307142 PTPDC1A2A3K4 754 aa12.27□□□□□ -0.44
SYNPO2-201ENST00000307142 ANKRD62A6NC57 917 aa12.27□□□□□ -0.44
SYNPO2-201ENST00000307142 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.44
SYNPO2-201ENST00000307142 MAP3K4Q9Y6R4 1608 aa12.27□□□□□ -0.44
SYNPO2-201ENST00000307142 TTC41PQ6P2S7 1318 aa12.27□□□□□ -0.44
SYNPO2-201ENST00000307142 IGHDP01880 384 aa12.27□□□□□ -0.44
SYNPO2-201ENST00000307142 STAT6P42226 847 aa12.27□□□□□ -0.44
SYNPO2-201ENST00000307142 MTIF2P46199 727 aaKnown RBP12.27□□□□□ -0.44
SYNPO2-201ENST00000307142 TCEANC2Q96MN5 208 aa12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms