RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 ATP2B3Q16720 1220 aa22.07■■□□□ 1.12
RNF139-201ENST00000303545 PUS7LQ9H0K6 701 aaKnown RBP22.07■■□□□ 1.12
RNF139-201ENST00000303545 LIG1P18858 919 aa22.06■■□□□ 1.12
RNF139-201ENST00000303545 BCL9O00512 1426 aa22.06■■□□□ 1.12
RNF139-201ENST00000303545 H3BQV1 296 aa22.06■■□□□ 1.12
RNF139-201ENST00000303545 CSPP1Q1MSJ5 1256 aa22.06■■□□□ 1.12
RNF139-201ENST00000303545 IFFO2Q5TF58 517 aa22.06■■□□□ 1.12
RNF139-201ENST00000303545 RAB11FIP4Q86YS3 637 aa22.06■■□□□ 1.12
RNF139-201ENST00000303545 PLCB2Q00722 1185 aa22.05■■□□□ 1.12
RNF139-201ENST00000303545 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
RNF139-201ENST00000303545 FAM184AQ8NB25 1140 aa22.05■■□□□ 1.12
RNF139-201ENST00000303545 USP25Q9UHP3 1055 aa22.05■■□□□ 1.12
RNF139-201ENST00000303545 SNAP23O00161 211 aa22.05■■□□□ 1.12
RNF139-201ENST00000303545 CTSWP56202 376 aa22.05■■□□□ 1.12
RNF139-201ENST00000303545 SPATA32Q96LK8 384 aa22.05■■□□□ 1.12
RNF139-201ENST00000303545 RIPOR2Q9Y4F9 1068 aa22.05■■□□□ 1.12
RNF139-201ENST00000303545 FOXP2O15409 715 aa22.04■■□□□ 1.12
RNF139-201ENST00000303545 MCAMP43121 646 aa22.04■■□□□ 1.12
RNF139-201ENST00000303545 GUCY1B3Q02153 619 aa22.04■■□□□ 1.12
RNF139-201ENST00000303545 RIC1Q4ADV7 1423 aa22.04■■□□□ 1.12
RNF139-201ENST00000303545 PLA2G12BQ9BX93 195 aa22.04■■□□□ 1.12
RNF139-201ENST00000303545 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.04■■□□□ 1.12
RNF139-201ENST00000303545 UBN2Q6ZU65 1347 aa22.03■■□□□ 1.12
RNF139-201ENST00000303545 ANKRD18BA2A2Z9 1011 aa22.03■■□□□ 1.12
RNF139-201ENST00000303545 CTDNEP1O95476 244 aa22.03■■□□□ 1.12
RNF139-201ENST00000303545 EXOSC10Q01780 885 aaKnown RBP22.03■■□□□ 1.12
RNF139-201ENST00000303545 FTOQ9C0B1 505 aaKnown RBP eCLIP22.02■■□□□ 1.12
RNF139-201ENST00000303545 TAOK2Q9UL54 1235 aa22.02■■□□□ 1.12
RNF139-201ENST00000303545 DISP2A7MBM2 1401 aa22.02■■□□□ 1.12
RNF139-201ENST00000303545 PFKFB2O60825 505 aa22.02■■□□□ 1.12
RNF139-201ENST00000303545 PTMAP06454 111 aaKnown RBP22.02■■□□□ 1.12
RNF139-201ENST00000303545 NSUN7Q8NE18 718 aaKnown RBP22.02■■□□□ 1.12
RNF139-201ENST00000303545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.01■■□□□ 1.11
RNF139-201ENST00000303545 PTPDC1A2A3K4 754 aa22.01■■□□□ 1.11
RNF139-201ENST00000303545 GOLGA6L4A6NEF3 574 aa22.01■■□□□ 1.11
RNF139-201ENST00000303545 FGAP02671 866 aa22.01■■□□□ 1.11
RNF139-201ENST00000303545 CKAP2LQ8IYA6 745 aa22.01■■□□□ 1.11
RNF139-201ENST00000303545 LEO1Q8WVC0 666 aaPredicted RBP22.01■■□□□ 1.11
RNF139-201ENST00000303545 HMGB1P09429 215 aaKnown RBP22.01■■□□□ 1.11
RNF139-201ENST00000303545 RESTQ13127 1097 aa22■■□□□ 1.11
RNF139-201ENST00000303545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22■■□□□ 1.11
RNF139-201ENST00000303545 DENND2AQ9ULE3 1009 aa22■■□□□ 1.11
RNF139-201ENST00000303545 NUTM2BA6NNL0 878 aaPredicted RBP21.99■■□□□ 1.11
RNF139-201ENST00000303545 NUTM2EB1AL46 878 aaPredicted RBP21.99■■□□□ 1.11
RNF139-201ENST00000303545 IDH1O75874 414 aaKnown RBP21.99■■□□□ 1.11
RNF139-201ENST00000303545 PHKA1P46020 1223 aa21.99■■□□□ 1.11
RNF139-201ENST00000303545 NUTM2AQ8IVF1 878 aaPredicted RBP21.99■■□□□ 1.11
RNF139-201ENST00000303545 DACT1Q9NYF0 836 aa21.99■■□□□ 1.11
RNF139-201ENST00000303545 CDHR2Q9BYE9 1310 aa21.99■■□□□ 1.11
RNF139-201ENST00000303545 GPAA1O43292 621 aa21.99■■□□□ 1.11
RNF139-201ENST00000303545 LETM1O95202 739 aaPredicted RBP21.99■■□□□ 1.11
RNF139-201ENST00000303545 PDIA3P30101 505 aaKnown RBP21.99■■□□□ 1.11
RNF139-201ENST00000303545 ZNF830Q96NB3 372 aaPredicted RBP21.99■■□□□ 1.11
RNF139-201ENST00000303545 NUP98P52948 1817 aa21.99■■□□□ 1.11
RNF139-201ENST00000303545 PIH1D3Q9NQM4 214 aaKnown RBP21.98■■□□□ 1.11
RNF139-201ENST00000303545 NOL7Q9UMY1 257 aaKnown RBP21.98■■□□□ 1.11
RNF139-201ENST00000303545 LRP6O75581 1613 aa21.98■■□□□ 1.11
RNF139-201ENST00000303545 MYO5AQ9Y4I1 1855 aaKnown RBP21.98■■□□□ 1.11
RNF139-201ENST00000303545 SLC9C2Q5TAH2 1124 aa21.98■■□□□ 1.11
RNF139-201ENST00000303545 SMARCC2Q8TAQ2 1214 aa21.98■■□□□ 1.11
RNF139-201ENST00000303545 PGBD1Q96JS3 809 aa21.98■■□□□ 1.11
RNF139-201ENST00000303545 FUCA2Q9BTY2 467 aa21.98■■□□□ 1.11
RNF139-201ENST00000303545 NWD2Q9ULI1 1742 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 BICD2Q8TD16 824 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 APPBP2Q92624 585 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 FBXO3Q9UK99 471 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 ROBO1Q9Y6N7 1651 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 PDE8AO60658 829 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 ATP6V1AP38606 617 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 IMMTQ16891 758 aaKnown RBP21.97■■□□□ 1.11
RNF139-201ENST00000303545 SUSD4Q5VX71 490 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 NKX2-3Q8TAU0 364 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 SCAND2PQ9GZW5 306 aaPredicted RBP21.97■■□□□ 1.11
RNF139-201ENST00000303545 SEC31BQ9NQW1 1179 aa21.97■■□□□ 1.11
RNF139-201ENST00000303545 ADCY5O95622 1261 aa21.96■■□□□ 1.11
RNF139-201ENST00000303545 OTUD7BQ6GQQ9 843 aa21.96■■□□□ 1.11
RNF139-201ENST00000303545 VGLL2Q8N8G2 317 aa21.96■■□□□ 1.11
RNF139-201ENST00000303545 NUP62CLQ9H1M0 184 aa21.96■■□□□ 1.11
RNF139-201ENST00000303545 COL14A1Q05707 1796 aaKnown RBP21.96■■□□□ 1.11
RNF139-201ENST00000303545 NR1I2O75469 434 aa21.96■■□□□ 1.11
RNF139-201ENST00000303545 APPP05067 770 aa21.96■■□□□ 1.11
RNF139-201ENST00000303545 PDE8BO95263 885 aa21.95■■□□□ 1.11
RNF139-201ENST00000303545 CCDC102BQ68D86 513 aa21.95■■□□□ 1.11
RNF139-201ENST00000303545 UBE2Q2Q8WVN8 375 aa21.95■■□□□ 1.11
RNF139-201ENST00000303545 CCDC39Q9UFE4 941 aa21.95■■□□□ 1.11
RNF139-201ENST00000303545 PRC1O43663 620 aa21.95■■□□□ 1.1
RNF139-201ENST00000303545 ZFYP08048 801 aaPredicted RBP21.95■■□□□ 1.1
RNF139-201ENST00000303545 DDB1Q16531 1140 aa21.95■■□□□ 1.1
RNF139-201ENST00000303545 SLIT2O94813 1529 aa21.95■■□□□ 1.1
RNF139-201ENST00000303545 ELP1O95163 1332 aa21.95■■□□□ 1.1
RNF139-201ENST00000303545 COL16A1Q07092 1604 aaPredicted RBP21.95■■□□□ 1.1
RNF139-201ENST00000303545 AP5Z1O43299 807 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 KDM4AO75164 1064 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 IL6STP40189 918 aaPredicted RBP21.94■■□□□ 1.1
RNF139-201ENST00000303545 LRRFIP1Q32MZ4 808 aaKnown RBP21.94■■□□□ 1.1
RNF139-201ENST00000303545 AGXT2Q9BYV1 514 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 WWC3Q9ULE0 1092 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 ZKSCAN5Q9Y2L8 839 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 MYH3P11055 1940 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 DOT1LQ8TEK3 1739 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms