RNA–Protein interactions for RNA: ENST00000297788.8

CCDC136-201, Transcript of coiled-coil domain containing 136, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC136, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-201ENST00000297788 DACT1Q9NYF0 836 aa11.27□□□□□ -0.61
CCDC136-201ENST00000297788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC136-201ENST00000297788 AKAP2Q9Y2D5 859 aa11.27□□□□□ -0.61
CCDC136-201ENST00000297788 TTC41PQ6P2S7 1318 aa11.27□□□□□ -0.61
CCDC136-201ENST00000297788 COL22A1Q8NFW1 1626 aaPredicted RBP11.27□□□□□ -0.61
CCDC136-201ENST00000297788 BIN1O00499 593 aa11.27□□□□□ -0.61
CCDC136-201ENST00000297788 STARD3NLO95772 234 aa11.27□□□□□ -0.61
CCDC136-201ENST00000297788 POLR3DP05423 398 aaPredicted RBP11.27□□□□□ -0.61
CCDC136-201ENST00000297788 DDX19AQ9NUU7 478 aaKnown RBP11.27□□□□□ -0.61
CCDC136-201ENST00000297788 AXIN2Q9Y2T1 843 aa11.27□□□□□ -0.61
CCDC136-201ENST00000297788 GOLGA8BA8MQT2 603 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 PIBF1Q8WXW3 757 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 LRP2BPQ9P2M1 347 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 ZKSCAN5Q9Y2L8 839 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 KDRP35968 1356 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 SGSM2O43147 1006 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 ZNF853P0CG23 659 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 BRMS1Q9HCU9 246 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 HMG20BQ9P0W2 317 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 LTN1O94822 1766 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 ZNF213O14771 459 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 IPO7O95373 1038 aaKnown RBP11.26□□□□□ -0.61
CCDC136-201ENST00000297788 C16orf45Q96MC5 204 aaPredicted RBP11.26□□□□□ -0.61
CCDC136-201ENST00000297788 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
CCDC136-201ENST00000297788 CLIP2Q9UDT6 1046 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 SNX14Q9Y5W7 946 aa11.26□□□□□ -0.61
CCDC136-201ENST00000297788 LDHAL6AQ6ZMR3 332 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 Q6ZUG5 572 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 GOLGA6L1Q8N7Z2 621 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 THRAP3Q9Y2W1 955 aaKnown RBP11.25□□□□□ -0.61
CCDC136-201ENST00000297788 USP16Q9Y5T5 823 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 IL2RBP14784 551 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 CHST3Q7LGC8 479 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 FAM227BQ96M60 508 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 TRMT112Q9UI30 125 aaKnown RBP11.25□□□□□ -0.61
CCDC136-201ENST00000297788 CDKL5O76039 1030 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 UVSSAQ2YD98 709 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 CCDC144CPQ8IYA2 1237 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 DDX21Q9NR30 783 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC136-201ENST00000297788 ANO10Q9NW15 660 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 TRMT1Q9NXH9 659 aaKnown RBP11.25□□□□□ -0.61
CCDC136-201ENST00000297788 RAI14Q9P0K7 980 aa11.25□□□□□ -0.61
CCDC136-201ENST00000297788 ORC3Q9UBD5 711 aaPredicted RBP11.25□□□□□ -0.61
CCDC136-201ENST00000297788 GADD45BO75293 160 aaPredicted RBP11.24□□□□□ -0.61
CCDC136-201ENST00000297788 MCM5P33992 734 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 UNC5CLQ8IV45 518 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 TMEM63CQ9P1W3 806 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 NDUFB9Q9Y6M9 179 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 CCDC171Q6TFL3 1326 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
CCDC136-201ENST00000297788 TFCP2Q12800 502 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 NBPF5PQ86XG9 351 aaPredicted RBP11.24□□□□□ -0.61
CCDC136-201ENST00000297788 CCAR1Q8IX12 1150 aaKnown RBP11.24□□□□□ -0.61
CCDC136-201ENST00000297788 UBAC1Q9BSL1 405 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 CRB1P82279 1406 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 NAP1L1P55209 391 aaKnown RBP11.24□□□□□ -0.61
CCDC136-201ENST00000297788 NBPF9Q3BBW0 867 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 CFAP100Q494V2 611 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 BICDL1Q6ZP65 573 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 CCDC47Q96A33 483 aaKnown RBP11.24□□□□□ -0.61
CCDC136-201ENST00000297788 CCDC66A2RUB6 948 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 MCMDC2Q4G0Z9 681 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 TMCO4Q5TGY1 634 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 NAPBQ9H115 298 aa11.24□□□□□ -0.61
CCDC136-201ENST00000297788 ARGLU1Q9NWB6 273 aaPredicted RBP11.24□□□□□ -0.61
CCDC136-201ENST00000297788 SHPRHQ149N8 1683 aa11.23□□□□□ -0.61
CCDC136-201ENST00000297788 GTF2A1P52655 376 aaPredicted RBP11.23□□□□□ -0.61
CCDC136-201ENST00000297788 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
CCDC136-201ENST00000297788 ANO6Q4KMQ2 910 aa11.23□□□□□ -0.61
CCDC136-201ENST00000297788 SPTY2D1Q68D10 685 aaPredicted RBP11.23□□□□□ -0.61
CCDC136-201ENST00000297788 CALR3Q96L12 384 aaKnown RBP11.23□□□□□ -0.61
CCDC136-201ENST00000297788 USP21Q9UK80 565 aa11.23□□□□□ -0.61
CCDC136-201ENST00000297788 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
CCDC136-201ENST00000297788 MARF1Q9Y4F3 1742 aaKnown RBP11.23□□□□□ -0.61
CCDC136-201ENST00000297788 IRF6O14896 467 aa11.23□□□□□ -0.61
CCDC136-201ENST00000297788 GNL3LQ9NVN8 582 aaKnown RBP11.23□□□□□ -0.61
CCDC136-201ENST00000297788 CCDC129Q6ZRS4 1044 aa11.23□□□□□ -0.61
CCDC136-201ENST00000297788 RUFY3Q7L099 469 aa11.23□□□□□ -0.61
CCDC136-201ENST00000297788 MICU3Q86XE3 530 aa11.23□□□□□ -0.61
CCDC136-201ENST00000297788 PDCL2Q8N4E4 241 aa11.23□□□□□ -0.61
CCDC136-201ENST00000297788 ZCRB1Q8TBF4 217 aaKnown RBP11.23□□□□□ -0.61
CCDC136-201ENST00000297788 GEMIN8Q9NWZ8 242 aaKnown RBP11.23□□□□□ -0.61
CCDC136-201ENST00000297788 COL5A2P05997 1499 aaPredicted RBP11.22□□□□□ -0.61
CCDC136-201ENST00000297788 TIMM10P62072 90 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 SATB1Q01826 763 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 CCDC186Q7Z3E2 898 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 SUCLG2Q96I99 432 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 RAD50Q92878 1312 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 EXOC5O00471 708 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 ZNF445P59923 1031 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 NOLC1Q14978 699 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC136-201ENST00000297788 EDC3Q96F86 508 aaKnown RBP11.22□□□□□ -0.61
CCDC136-201ENST00000297788 DNAJC25Q9H1X3 360 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 FAM208AQ9UK61 1670 aaKnown RBP11.22□□□□□ -0.61
CCDC136-201ENST00000297788 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 PTPN14Q15678 1187 aa11.22□□□□□ -0.61
CCDC136-201ENST00000297788 SSH3Q8TE77 659 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms