RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 DDX12PQ92771 950 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 SMC6Q96SB8 1091 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 PLVAPQ9BX97 442 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 F6X3S4 739 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 CATIPQ7Z7H3 387 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 CCDC77Q9BR77 488 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 METP08581 1390 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 A2ML1A8K2U0 1454 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 A0A087WZG4 1122 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 SYKP43405 635 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 FERMT2Q96AC1 680 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 PYM1Q9BRP8 204 aaKnown RBP12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 CHMP4BP1P59074 171 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 ZEB2O60315 1214 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 CCDC114Q96M63 670 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 ZMYM4Q5VZL5 1548 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 CLTCQ00610 1675 aaKnown RBP12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 ZFYVE9O95405 1425 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 CAVIN4Q5BKX8 364 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 TRMT1LQ7Z2T5 733 aaKnown RBP12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 MICU3Q86XE3 530 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 GOLGA1Q92805 767 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 ZBTB9Q96C00 473 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 VPS18Q9P253 973 aa12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 PUF60Q9UHX1 559 aaKnown RBP12.23□□□□□ -0.45
PKNOX1-201ENST00000291547 ZSCAN22P10073 491 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 APBB1IPQ7Z5R6 666 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 PTGS1P23219 599 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 CUL5Q93034 780 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 SNX21Q969T3 373 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 ZSCAN16Q9H4T2 348 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 ECHDC1Q9NTX5 307 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 TACC1O75410 805 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 SEPT6Q14141 434 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 CPLX4Q7Z7G2 160 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 EVI5LQ96CN4 794 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 TMX3Q96JJ7 454 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 TTC14Q96N46 770 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 NAP1L3Q99457 506 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 FERMT1Q9BQL6 677 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 SELENOOQ9BVL4 669 aa12.22□□□□□ -0.45
PKNOX1-201ENST00000291547 SPAG1Q07617 926 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 DNAJC21Q5F1R6 531 aaKnown RBP12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 RRAGBQ5VZM2 374 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 SYCP3Q8IZU3 236 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 NEK1Q96PY6 1258 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 MYD88Q99836 296 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 CTAGE9A4FU28 777 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 TUBB4AP04350 444 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 SYT1P21579 422 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 TMEM67Q5HYA8 995 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 GBP6Q6ZN66 633 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 NBPF11Q86T75 865 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 DZIP1Q86YF9 867 aaKnown RBP12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 SREK1Q8WXA9 508 aaKnown RBP12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 CTAGE1Q96RT6 745 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 ADGRB3O60242 1522 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 STXBP4Q6ZWJ1 553 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 ARFGAP2Q8N6H7 521 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 SELENOSQ9BQE4 189 aa12.21□□□□□ -0.45
PKNOX1-201ENST00000291547 NUTM2BA6NNL0 878 aaPredicted RBP12.21□□□□□ -0.46
PKNOX1-201ENST00000291547 NUTM2EB1AL46 878 aaPredicted RBP12.21□□□□□ -0.46
PKNOX1-201ENST00000291547 CCDC172P0C7W6 258 aa12.21□□□□□ -0.46
PKNOX1-201ENST00000291547 NUTM2AQ8IVF1 878 aaPredicted RBP12.21□□□□□ -0.46
PKNOX1-201ENST00000291547 AOPEPQ8N6M6 819 aa12.21□□□□□ -0.46
PKNOX1-201ENST00000291547 DNAJC25Q9H1X3 360 aa12.21□□□□□ -0.46
PKNOX1-201ENST00000291547 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 STMN4Q9H169 189 aaPredicted RBP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 DACT1Q9NYF0 836 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 RASAL2Q9UJF2 1139 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 CNPY2Q9Y2B0 182 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 TRIM27P14373 513 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 KIF5BP33176 963 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 PPM1FP49593 454 aaPredicted RBP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 METAP2P50579 478 aaKnown RBP eCLIP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 HAND2P61296 217 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 RAB3GAP1Q15042 981 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 SLC26A6Q9BXS9 759 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 EXOC1Q9NV70 894 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 RMND1Q9NWS8 449 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 STIM2Q9P246 746 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 ZC3H13Q5T200 1668 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 FBLN1P23142 703 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 AFMP43652 599 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 ZNF445P59923 1031 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 IFIT5Q13325 482 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 NAA25Q14CX7 972 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 NECAB1Q8N987 351 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 ZNF526Q8TF50 670 aaPredicted RBP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 KDM5AP29375 1690 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 NPHP4O75161 1426 aaPredicted RBP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 CCDC129Q6ZRS4 1044 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms