RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 KINO60870 393 aaKnown RBP15.52■□□□□ 0.07
SLC28A1-201ENST00000286749 CASP7P55210 303 aa15.52■□□□□ 0.07
SLC28A1-201ENST00000286749 EXOSC10Q01780 885 aaKnown RBP15.52■□□□□ 0.07
SLC28A1-201ENST00000286749 LRRC8AQ8IWT6 810 aa15.52■□□□□ 0.07
SLC28A1-201ENST00000286749 MRFAP1L1Q96HT8 127 aa15.52■□□□□ 0.07
SLC28A1-201ENST00000286749 KIF1AQ12756 1690 aa15.52■□□□□ 0.07
SLC28A1-201ENST00000286749 BECN2A8MW95 431 aa15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 ME1P48163 572 aa15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 CHST3Q7LGC8 479 aa15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 ZNF396Q96N95 335 aaPredicted RBP15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 E7EWF7 191 aa15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 FAM160A1Q05DH4 1040 aa15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 FSIP1Q8NA03 581 aa15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 ENGASEQ8NFI3 743 aa15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 ERCC4Q92889 916 aaPredicted RBP15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 DSCC1Q9BVC3 393 aa15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 HELLSQ9NRZ9 838 aa15.51■□□□□ 0.07
SLC28A1-201ENST00000286749 TIMM10P62072 90 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 ILDR1Q86SU0 546 aaPredicted RBP15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 DHX40Q8IX18 779 aaKnown RBP15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 CCDC112Q8NEF3 446 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 ZNF592Q92610 1267 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 AGXT2Q9BYV1 514 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 PAXBP1Q9Y5B6 917 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 SALL1Q9NSC2 1324 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 USP27XA6NNY8 438 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 NAA30Q147X3 362 aaPredicted RBP15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 ATG9AQ7Z3C6 839 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 IFNL2Q8IZJ0 200 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 FBXW7Q969H0 707 aa15.5■□□□□ 0.07
SLC28A1-201ENST00000286749 HSPD1P10809 573 aaKnown RBP15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 FOXO4P98177 505 aa15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 ZMYM1Q5SVZ6 1142 aa15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 CEP135Q66GS9 1140 aa15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 PDIA3P30101 505 aaKnown RBP15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 UTP14CQ5TAP6 766 aaKnown RBP15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 FILIP1Q7Z7B0 1213 aa15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 PLBD2Q8NHP8 589 aa15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 ANO10Q9NW15 660 aa15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 ZHX1Q9UKY1 873 aaPredicted RBP15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 MAST3O60307 1309 aa15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 CARMIL3Q8ND23 1372 aa15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 LAMB4A4D0S4 1761 aa15.49■□□□□ 0.07
SLC28A1-201ENST00000286749 SKILP12757 684 aa15.48■□□□□ 0.07
SLC28A1-201ENST00000286749 SYCP1Q15431 976 aa15.48■□□□□ 0.07
SLC28A1-201ENST00000286749 ATL3Q6DD88 541 aa15.48■□□□□ 0.07
SLC28A1-201ENST00000286749 AOPEPQ8N6M6 819 aa15.48■□□□□ 0.07
SLC28A1-201ENST00000286749 RBM6P78332 1123 aaKnown RBP15.48■□□□□ 0.07
SLC28A1-201ENST00000286749 BCL11BQ9C0K0 894 aaPredicted RBP15.48■□□□□ 0.07
SLC28A1-201ENST00000286749 CCDC69A6NI79 296 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 NEMFO60524 1076 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 TTLL5Q6EMB2 1281 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 CEP57L1Q8IYX8 460 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 PCDHA7Q9UN72 937 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 ZNF142P52746 1687 aaPredicted RBP15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 ALS2Q96Q42 1657 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 CYP27B1O15528 508 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 ZNF274Q96GC6 653 aaPredicted RBP15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 DCAF5Q96JK2 942 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 ABCC6O95255 1503 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 TJP1Q07157 1748 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 H7C1W4 665 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 M0R2C6 588 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 CSB-PGBD3P0DP91 1061 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 FDPSP14324 419 aaKnown RBP15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 CCZ1BP86790 482 aa15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 CCZ1P86791 482 aaPredicted RBP15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 MRPS27Q92552 414 aaKnown RBP15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 GPHNQ9NQX3 736 aaPredicted RBP15.47■□□□□ 0.07
SLC28A1-201ENST00000286749 GLI3P10071 1580 aa15.46■□□□□ 0.07
SLC28A1-201ENST00000286749 A0A1B0GVL5 298 aa15.46■□□□□ 0.07
SLC28A1-201ENST00000286749 RNF113AO15541 343 aaKnown RBP15.46■□□□□ 0.07
SLC28A1-201ENST00000286749 IFIT1P09914 478 aaKnown RBP15.46■□□□□ 0.07
SLC28A1-201ENST00000286749 LRRC24Q50LG9 513 aa15.46■□□□□ 0.07
SLC28A1-201ENST00000286749 FMR1NBQ8N0W7 255 aaPredicted RBP15.46■□□□□ 0.07
SLC28A1-201ENST00000286749 ZNF594Q96JF6 807 aaPredicted RBP15.46■□□□□ 0.07
SLC28A1-201ENST00000286749 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.07
SLC28A1-201ENST00000286749 NWD2Q9ULI1 1742 aa15.46■□□□□ 0.07
SLC28A1-201ENST00000286749 PTPN14Q15678 1187 aa15.46■□□□□ 0.06
SLC28A1-201ENST00000286749 OTUD7BQ6GQQ9 843 aa15.46■□□□□ 0.06
SLC28A1-201ENST00000286749 SDF4Q9BRK5 362 aa15.46■□□□□ 0.06
SLC28A1-201ENST00000286749 TRMT1Q9NXH9 659 aaKnown RBP15.46■□□□□ 0.06
SLC28A1-201ENST00000286749 IL15P40933 162 aaPredicted RBP15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 CABP4P57796 275 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 NYAP1Q6ZVC0 841 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 GPR108Q9NPR9 543 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 NUP188Q5SRE5 1749 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 NBPF26B4DH59 902 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 NDUFA8P51970 172 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 NBPF14Q5TI25 921 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 NBPF10Q6P3W6 841 aaKnown RBP15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 NBPF15Q8N660 670 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 FEZ1Q99689 392 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 GTPBP4Q9BZE4 634 aaKnown RBP15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 NAT10Q9H0A0 1025 aaKnown RBP15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 RTEL1Q9NZ71 1219 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 CTNNA3Q9UI47 895 aa15.45■□□□□ 0.06
SLC28A1-201ENST00000286749 SPEF2Q9C093 1822 aa15.44■□□□□ 0.06
SLC28A1-201ENST00000286749 TTLL7Q6ZT98 887 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms