RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 KANK3Q6NY19 840 aa17.74■□□□□ 0.43
TIMP3-201ENST00000266085 TRMT1LQ7Z2T5 733 aaKnown RBP17.74■□□□□ 0.43
TIMP3-201ENST00000266085 XAGE2Q96GT9 111 aa17.74■□□□□ 0.43
TIMP3-201ENST00000266085 MBD4O95243 580 aa17.74■□□□□ 0.43
TIMP3-201ENST00000266085 APOBRQ0VD83 1088 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 PTPN14Q15678 1187 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 KCNG4Q8TDN1 519 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 ZSCAN12O43309 604 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 CPA1P15085 419 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 PLCG2P16885 1265 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 AMPD3Q01432 767 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 NEURL1BA8MQ27 555 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 ERLIN2O94905 339 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 MATR3P43243 847 aaKnown RBP eCLIP17.73■□□□□ 0.43
TIMP3-201ENST00000266085 TCIRG1Q13488 830 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 EHMT1Q9H9B1 1298 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 ERLIN1O75477 346 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 BMP15O95972 392 aa17.73■□□□□ 0.43
TIMP3-201ENST00000266085 USP6P35125 1406 aa17.72■□□□□ 0.43
TIMP3-201ENST00000266085 TAF5LO75529 589 aa17.72■□□□□ 0.43
TIMP3-201ENST00000266085 CCDC129Q6ZRS4 1044 aa17.72■□□□□ 0.43
TIMP3-201ENST00000266085 CACNA2D4Q7Z3S7 1137 aa17.72■□□□□ 0.43
TIMP3-201ENST00000266085 EYA3Q99504 573 aa17.72■□□□□ 0.43
TIMP3-201ENST00000266085 F13A1P00488 732 aa17.72■□□□□ 0.43
TIMP3-201ENST00000266085 SYKP43405 635 aa17.72■□□□□ 0.43
TIMP3-201ENST00000266085 RBM10P98175 930 aaKnown RBP17.72■□□□□ 0.43
TIMP3-201ENST00000266085 CNPY2Q9Y2B0 182 aa17.72■□□□□ 0.43
TIMP3-201ENST00000266085 AXDND1Q5T1B0 1012 aaPredicted RBP17.72■□□□□ 0.43
TIMP3-201ENST00000266085 DENND2AQ9ULE3 1009 aa17.72■□□□□ 0.43
TIMP3-201ENST00000266085 WDHD1O75717 1129 aaPredicted RBP17.71■□□□□ 0.43
TIMP3-201ENST00000266085 CHMP4BP1P59074 171 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 RNF123Q5XPI4 1314 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 TTLL7Q6ZT98 887 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 IGSF1Q8N6C5 1336 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 HIBADHP31937 336 aaKnown RBP17.71■□□□□ 0.43
TIMP3-201ENST00000266085 SPA17Q15506 151 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 ISM2Q6H9L7 571 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 GIMAP6Q6P9H5 292 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 INTS4Q96HW7 963 aaKnown RBP17.71■□□□□ 0.43
TIMP3-201ENST00000266085 NDUFB9Q9Y6M9 179 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 UBXN4Q92575 508 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 HELLSQ9NRZ9 838 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 ABCC3O15438 1527 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 UQCRHLA0A096LP55 91 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 UFL1O94874 794 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 UQCRHP07919 91 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 IQCEQ6IPM2 695 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 CCDC148Q8NFR7 591 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 VEZTQ9HBM0 779 aa17.71■□□□□ 0.43
TIMP3-201ENST00000266085 ABCC4O15439 1325 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 KDM2BQ8NHM5 1336 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 POLD1P28340 1107 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 ZSCAN23Q3MJ62 389 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 JDP2Q8WYK2 163 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 ATP7BP35670 1465 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
TIMP3-201ENST00000266085 RUFY3Q7L099 469 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 HEATR3Q7Z4Q2 680 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 USP48Q86UV5 1035 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 RBM17Q96I25 401 aaKnown RBP17.7■□□□□ 0.42
TIMP3-201ENST00000266085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.7■□□□□ 0.42
TIMP3-201ENST00000266085 PPP4R3BQ5MIZ7 849 aa17.7■□□□□ 0.42
TIMP3-201ENST00000266085 NEMFO60524 1076 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 RXRAP19793 462 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 ADCY5O95622 1261 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 KIF18AQ8NI77 898 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 MRPS27Q92552 414 aaKnown RBP17.69■□□□□ 0.42
TIMP3-201ENST00000266085 GSDMDP57764 484 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 UVSSAQ2YD98 709 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 RBM26Q5T8P6 1007 aaKnown RBP17.69■□□□□ 0.42
TIMP3-201ENST00000266085 KBTBD3Q8NAB2 608 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 APPBP2Q92624 585 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 TAF4BQ92750 862 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 KDM5CP41229 1560 aa17.69■□□□□ 0.42
TIMP3-201ENST00000266085 SKIDA1Q1XH10 827 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 LRSAM1Q6UWE0 723 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 LPIN2Q92539 896 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 SGSM2O43147 1006 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 STK32BQ9NY57 414 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 TRAF1Q13077 416 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 VPS36Q86VN1 386 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 CPLX3Q8WVH0 158 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 CARD10Q9BWT7 1032 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 DACT1Q9NYF0 836 aa17.68■□□□□ 0.42
TIMP3-201ENST00000266085 MARCKSP29966 332 aaPredicted RBP17.68■□□□□ 0.42
TIMP3-201ENST00000266085 MTIF2P46199 727 aaKnown RBP17.68■□□□□ 0.42
TIMP3-201ENST00000266085 PTPDC1A2A3K4 754 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 CALM1P0DP23 149 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 CALM2P0DP24 149 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 CALM3P0DP25 149 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 SSH3Q8TE77 659 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 ZKSCAN3Q9BRR0 538 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 PPP4R3AQ6IN85 833 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 NUP88Q99567 741 aaPredicted RBP17.67■□□□□ 0.42
TIMP3-201ENST00000266085 AOX1Q06278 1338 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 ARHGAP31Q2M1Z3 1444 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 GPAA1O43292 621 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 KIF5CO60282 957 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms