RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 UBA5Q9GZZ9 404 aa16.08■□□□□ 0.16
CDH1-201ENST00000261769 JAG2Q9Y219 1238 aa16.08■□□□□ 0.16
CDH1-201ENST00000261769 PRKCSHP14314 528 aaPredicted RBP16.07■□□□□ 0.16
CDH1-201ENST00000261769 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
CDH1-201ENST00000261769 TNNI3KQ59H18 835 aa16.07■□□□□ 0.16
CDH1-201ENST00000261769 FPGT-TNNI3KV9GXZ4 949 aa16.07■□□□□ 0.16
CDH1-201ENST00000261769 IL6STP40189 918 aaPredicted RBP16.07■□□□□ 0.16
CDH1-201ENST00000261769 C2CD5Q86YS7 1000 aa16.07■□□□□ 0.16
CDH1-201ENST00000261769 HELLSQ9NRZ9 838 aa16.07■□□□□ 0.16
CDH1-201ENST00000261769 CDR1P51861 262 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 MSL1Q68DK7 614 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 KDM5AP29375 1690 aaKnown RBP16.06■□□□□ 0.16
CDH1-201ENST00000261769 CALML3P27482 149 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 XAGE2Q96GT9 111 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 IGSF1Q8N6C5 1336 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 PRR36Q9H6K5 1346 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 PRC1O43663 620 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 MBD4O95243 580 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 TTLL5Q6EMB2 1281 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 C6orf50Q9HD87 102 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 PLS1Q14651 629 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 CCDC24Q8N4L8 307 aa16.06■□□□□ 0.16
CDH1-201ENST00000261769 RRP36Q96EU6 259 aaKnown RBP16.05■□□□□ 0.16
CDH1-201ENST00000261769 CCDC171Q6TFL3 1326 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
CDH1-201ENST00000261769 CTAGE5O15320 804 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 NAPAP54920 295 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 HEATR3Q7Z4Q2 680 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 CCDC150Q8NCX0 1101 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 GJB2P29033 226 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 DLGAP5Q15398 846 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 TMOD4Q9NZQ9 345 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 RLBP1P12271 317 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 CETN1Q12798 172 aa16.05■□□□□ 0.16
CDH1-201ENST00000261769 ZSCAN16Q9H4T2 348 aaPredicted RBP16.05■□□□□ 0.16
CDH1-201ENST00000261769 KIF1BO60333 1816 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 SPDYE3A6NKU9 549 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
CDH1-201ENST00000261769 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 BEGAINQ9BUH8 593 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 ARHGEF10LQ9HCE6 1279 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 NEURL1BA8MQ27 555 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 CNNM3Q8NE01 707 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 TET3O43151 1660 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 IDEP14735 1019 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 FKBP15Q5T1M5 1219 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 RUFY1Q96T51 708 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 ALG1Q9BT22 464 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 SEPT11Q9NVA2 429 aaKnown RBP16.04■□□□□ 0.16
CDH1-201ENST00000261769 ANO10Q9NW15 660 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 MAP3K15Q6ZN16 1313 aa16.04■□□□□ 0.16
CDH1-201ENST00000261769 STX6O43752 255 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 CTSWP56202 376 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 TNFAIP1Q13829 316 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 USPL1Q5W0Q7 1092 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 CERKQ8TCT0 537 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 VTI1AQ96AJ9 217 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 PCCAP05165 728 aaPredicted RBP16.03■□□□□ 0.16
CDH1-201ENST00000261769 KANK3Q6NY19 840 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 ZBTB38Q8NAP3 1195 aaPredicted RBP16.03■□□□□ 0.16
CDH1-201ENST00000261769 ZNF594Q96JF6 807 aaPredicted RBP16.03■□□□□ 0.16
CDH1-201ENST00000261769 DBNDD2Q9BQY9 259 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 ASAP1Q9ULH1 1129 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 ZNF397Q8NF99 534 aaPredicted RBP16.03■□□□□ 0.16
CDH1-201ENST00000261769 ZNF408Q9H9D4 720 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 MCM4P33991 863 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 APPBP2Q92624 585 aa16.03■□□□□ 0.16
CDH1-201ENST00000261769 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.16
CDH1-201ENST00000261769 TAF5LO75529 589 aa16.02■□□□□ 0.16
CDH1-201ENST00000261769 TMC4Q7Z404 712 aa16.02■□□□□ 0.16
CDH1-201ENST00000261769 ARGLU1Q9NWB6 273 aaPredicted RBP16.02■□□□□ 0.16
CDH1-201ENST00000261769 SYNMO15061 1565 aa16.02■□□□□ 0.16
CDH1-201ENST00000261769 GNA11P29992 359 aa16.02■□□□□ 0.16
CDH1-201ENST00000261769 LARP6Q9BRS8 491 aaKnown RBP16.02■□□□□ 0.15
CDH1-201ENST00000261769 ACBD3Q9H3P7 528 aa16.02■□□□□ 0.15
CDH1-201ENST00000261769 AFF2P51816 1311 aa16.02■□□□□ 0.15
CDH1-201ENST00000261769 TBCAO75347 108 aaKnown RBP16.01■□□□□ 0.15
CDH1-201ENST00000261769 Q6ZUG5 572 aa16.01■□□□□ 0.15
CDH1-201ENST00000261769 ARHGAP27Q6ZUM4 889 aa16.01■□□□□ 0.15
CDH1-201ENST00000261769 TNNQ9UQP3 1299 aa16.01■□□□□ 0.15
CDH1-201ENST00000261769 KCNQ3O43525 872 aa16.01■□□□□ 0.15
CDH1-201ENST00000261769 RBM6P78332 1123 aaKnown RBP16.01■□□□□ 0.15
CDH1-201ENST00000261769 RAB3GAP1Q15042 981 aa16.01■□□□□ 0.15
CDH1-201ENST00000261769 FSIP1Q8NA03 581 aa16.01■□□□□ 0.15
CDH1-201ENST00000261769 LRRC2Q9BYS8 371 aa16.01■□□□□ 0.15
CDH1-201ENST00000261769 TTLL7Q6ZT98 887 aa16■□□□□ 0.15
CDH1-201ENST00000261769 DHX32Q7L7V1 743 aaKnown RBP16■□□□□ 0.15
CDH1-201ENST00000261769 TRMT1LQ7Z2T5 733 aaKnown RBP16■□□□□ 0.15
CDH1-201ENST00000261769 SSFA2P28290 1259 aa16■□□□□ 0.15
CDH1-201ENST00000261769 KLHL10Q6JEL2 608 aa16■□□□□ 0.15
CDH1-201ENST00000261769 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
CDH1-201ENST00000261769 FBXO3Q9UK99 471 aa16■□□□□ 0.15
CDH1-201ENST00000261769 LIG1P18858 919 aa16■□□□□ 0.15
CDH1-201ENST00000261769 GIGYF2Q6Y7W6 1299 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms