RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 MYCLP12524 364 aaPredicted RBP16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 RNF34Q969K3 372 aa16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 STAT6P42226 847 aa16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 SLFN5Q08AF3 891 aa16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 PRPF4BQ13523 1007 aaKnown RBP16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 KANK3Q6NY19 840 aa16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 ANO10Q9NW15 660 aa16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 YTHDC2Q9H6S0 1430 aaKnown RBP16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 TRAK2O60296 914 aa16.33■□□□□ 0.21
ZC3H4-201ENST00000253048 CEP83Q9Y592 693 aa16.33■□□□□ 0.21
ZC3H4-201ENST00000253048 UQCRHLA0A096LP55 91 aa16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 CBX1P83916 185 aa16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 KLF18A0A0U1RQI7 1052 aa16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 NDC80O14777 642 aa16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 BMP15O95972 392 aa16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 MYZAPP0CAP1 466 aa16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 DCAF15Q66K64 600 aa16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 PROCA1Q8NCQ7 364 aaPredicted RBP16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 SCAND2PQ9GZW5 306 aaPredicted RBP16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 BCCIPQ9P287 314 aaKnown RBP eCLIP16.33■□□□□ 0.2
ZC3H4-201ENST00000253048 SREK1Q8WXA9 508 aaKnown RBP16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 HARSP12081 509 aaKnown RBP16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 DNM2P50570 870 aa16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 DKC1O60832 514 aaKnown RBP eCLIP16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 FILIP1Q7Z7B0 1213 aa16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 IP6K1Q92551 441 aa16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 PANK2Q9BZ23 570 aa16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 GPCPD1Q9NPB8 672 aa16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 IKBKGQ9Y6K9 419 aa16.32■□□□□ 0.2
ZC3H4-201ENST00000253048 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 EIF3JO75822 258 aaKnown RBP16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 KRT79Q5XKE5 535 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 FAM196AQ6ZSG2 479 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 SH3TC1Q8TE82 1336 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 PCF11O94913 1555 aaKnown RBP16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 IFFO1Q0D2I5 559 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 TRIM47Q96LD4 638 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 GOLGA6L10A0A0M3HER8 536 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 GNA11P29992 359 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 CDAN1Q8IWY9 1227 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 NOC2LQ9Y3T9 749 aaKnown RBP16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 MRE11P49959 708 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 CNKSR1Q969H4 720 aa16.31■□□□□ 0.2
ZC3H4-201ENST00000253048 MAP2K1Q02750 393 aaPredicted RBP16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 CERS3Q8IU89 383 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 MAP3K5Q99683 1374 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 RAB3IL1Q8TBN0 382 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 WDR66Q8TBY9 1149 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 PAG1Q9NWQ8 432 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 CCDC24Q8N4L8 307 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 SH3BP5O60239 455 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 TOP1P11387 765 aaKnown RBP16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 TCP10Q12799 353 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 IFT74Q96LB3 600 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 PLVAPQ9BX97 442 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 TRIM37O94972 964 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 CALML3P27482 149 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 SPATA24Q86W54 205 aa16.3■□□□□ 0.2
ZC3H4-201ENST00000253048 KRT27Q7Z3Y8 459 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 FAM200AQ8TCP9 573 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 HOXC9P31274 260 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 STRN3Q13033 797 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 UBE4AQ14139 1066 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 SMC1AQ14683 1233 aaKnown RBP16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 IFI16Q16666 785 aaKnown RBP16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 FSIP1Q8NA03 581 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 FBLN1P23142 703 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 FCHSD1Q86WN1 690 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 CPLX3Q8WVH0 158 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 ORAI2Q96SN7 254 aa16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
ZC3H4-201ENST00000253048 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 KIF5CO60282 957 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 PDE8AO60658 829 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 PAFAH1B1P43034 410 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 SNX16P57768 344 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 MCMDC2Q4G0Z9 681 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 CHST3Q7LGC8 479 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 CPXCR1Q8N123 301 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 HS2ST1Q7LGA3 356 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 GAS8O95995 478 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 GJC1P36383 396 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 ARMC9Q7Z3E5 817 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 SPAG5Q96R06 1193 aa16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 DDX17Q92841 729 aaKnown RBP16.28■□□□□ 0.2
ZC3H4-201ENST00000253048 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 SMTNP53814 917 aa16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 NSMFQ6X4W1 530 aa16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 PPP1R14CQ8TAE6 165 aa16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 RHPN1Q8TCX5 695 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms