RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 DOK7Q18PE1 504 aa11.71□□□□□ -0.53
MDH1-201ENST00000233114 LRRFIP1Q32MZ4 808 aaKnown RBP11.71□□□□□ -0.53
MDH1-201ENST00000233114 NBPF14Q5TI25 921 aa11.71□□□□□ -0.53
MDH1-201ENST00000233114 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
MDH1-201ENST00000233114 NBPF10Q6P3W6 841 aaKnown RBP11.71□□□□□ -0.53
MDH1-201ENST00000233114 NBPF15Q8N660 670 aa11.71□□□□□ -0.53
MDH1-201ENST00000233114 DSCC1Q9BVC3 393 aa11.71□□□□□ -0.53
MDH1-201ENST00000233114 SCAND2PQ9GZW5 306 aaPredicted RBP11.71□□□□□ -0.53
MDH1-201ENST00000233114 PRDM11Q9NQV5 511 aa11.71□□□□□ -0.53
MDH1-201ENST00000233114 ABCC12Q96J65 1359 aa11.71□□□□□ -0.53
MDH1-201ENST00000233114 FIBPO43427 364 aa11.71□□□□□ -0.54
MDH1-201ENST00000233114 IL2RBP14784 551 aa11.71□□□□□ -0.54
MDH1-201ENST00000233114 BRD2P25440 801 aaKnown RBP11.71□□□□□ -0.54
MDH1-201ENST00000233114 TRIM28Q13263 835 aaKnown RBP11.71□□□□□ -0.54
MDH1-201ENST00000233114 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.54
MDH1-201ENST00000233114 EFCAB3Q8N7B9 438 aa11.71□□□□□ -0.54
MDH1-201ENST00000233114 NEK1Q96PY6 1258 aa11.71□□□□□ -0.54
MDH1-201ENST00000233114 DBNDD2Q9BQY9 259 aa11.71□□□□□ -0.54
MDH1-201ENST00000233114 LLPHQ9BRT6 129 aaKnown RBP11.71□□□□□ -0.54
MDH1-201ENST00000233114 VPS37CA5D8V6 355 aaPredicted RBP11.7□□□□□ -0.54
MDH1-201ENST00000233114 ATP5J2-PTCD1G3V325 749 aa11.7□□□□□ -0.54
MDH1-201ENST00000233114 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
MDH1-201ENST00000233114 DNM1Q05193 864 aaKnown RBP11.7□□□□□ -0.54
MDH1-201ENST00000233114 GTF3C6Q969F1 213 aa11.7□□□□□ -0.54
MDH1-201ENST00000233114 TEX13AQ9BXU3 409 aaPredicted RBP11.7□□□□□ -0.54
MDH1-201ENST00000233114 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
MDH1-201ENST00000233114 EYA2O00167 538 aa11.69□□□□□ -0.54
MDH1-201ENST00000233114 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
MDH1-201ENST00000233114 NECAB1Q8N987 351 aa11.69□□□□□ -0.54
MDH1-201ENST00000233114 LARP6Q9BRS8 491 aaKnown RBP11.69□□□□□ -0.54
MDH1-201ENST00000233114 FUCA2Q9BTY2 467 aa11.69□□□□□ -0.54
MDH1-201ENST00000233114 KIF3AQ9Y496 699 aa11.69□□□□□ -0.54
MDH1-201ENST00000233114 PDE4CQ08493 712 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 FOXD4L6Q3SYB3 417 aaPredicted RBP11.68□□□□□ -0.54
MDH1-201ENST00000233114 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 FOXD4L3Q6VB84 417 aaPredicted RBP11.68□□□□□ -0.54
MDH1-201ENST00000233114 DNAJC2Q99543 621 aaKnown RBP11.68□□□□□ -0.54
MDH1-201ENST00000233114 ISCA1Q9BUE6 129 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 ZSCAN16Q9H4T2 348 aaPredicted RBP11.68□□□□□ -0.54
MDH1-201ENST00000233114 PAG1Q9NWQ8 432 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 TTLL7Q6ZT98 887 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 CDC37L1Q7L3B6 337 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 FBXL16Q8N461 479 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 RNF214Q8ND24 703 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 EDC3Q96F86 508 aaKnown RBP11.68□□□□□ -0.54
MDH1-201ENST00000233114 AGXT2Q9BYV1 514 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 AKAP2Q9Y2D5 859 aa11.68□□□□□ -0.54
MDH1-201ENST00000233114 LRP6O75581 1613 aa11.67□□□□□ -0.54
MDH1-201ENST00000233114 NHSL1Q5SYE7 1610 aa11.67□□□□□ -0.54
MDH1-201ENST00000233114 PFKFB2O60825 505 aa11.67□□□□□ -0.54
MDH1-201ENST00000233114 ZFYP08048 801 aaPredicted RBP11.67□□□□□ -0.54
MDH1-201ENST00000233114 CCDC192P0DO97 292 aa11.67□□□□□ -0.54
MDH1-201ENST00000233114 PIP4K2AP48426 406 aaPredicted RBP11.67□□□□□ -0.54
MDH1-201ENST00000233114 HMGN5P82970 282 aaKnown RBP11.67□□□□□ -0.54
MDH1-201ENST00000233114 ATL3Q6DD88 541 aa11.67□□□□□ -0.54
MDH1-201ENST00000233114 DHX32Q7L7V1 743 aaKnown RBP11.67□□□□□ -0.54
MDH1-201ENST00000233114 SMARCC2Q8TAQ2 1214 aa11.67□□□□□ -0.54
MDH1-201ENST00000233114 DDX19AQ9NUU7 478 aaKnown RBP11.67□□□□□ -0.54
MDH1-201ENST00000233114 TOGARAM1Q9Y4F4 1720 aa11.67□□□□□ -0.54
MDH1-201ENST00000233114 LAMA4Q16363 1823 aa11.67□□□□□ -0.54
MDH1-201ENST00000233114 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
MDH1-201ENST00000233114 PCCAP05165 728 aaPredicted RBP11.66□□□□□ -0.54
MDH1-201ENST00000233114 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
MDH1-201ENST00000233114 TPM3P06753 285 aa11.66□□□□□ -0.54
MDH1-201ENST00000233114 CYP21A2P08686 494 aa11.66□□□□□ -0.54
MDH1-201ENST00000233114 TCIRG1Q13488 830 aa11.66□□□□□ -0.54
MDH1-201ENST00000233114 NAA16Q6N069 864 aaPredicted RBP11.66□□□□□ -0.54
MDH1-201ENST00000233114 TTC6Q86TZ1 520 aa11.66□□□□□ -0.54
MDH1-201ENST00000233114 CEP126Q9P2H0 1117 aa11.66□□□□□ -0.54
MDH1-201ENST00000233114 CHMP3Q9Y3E7 222 aa11.66□□□□□ -0.54
MDH1-201ENST00000233114 DDX46Q7L014 1031 aaKnown RBP11.65□□□□□ -0.54
MDH1-201ENST00000233114 RGS22Q8NE09 1264 aa11.65□□□□□ -0.54
MDH1-201ENST00000233114 JARID2Q92833 1246 aaPredicted RBP11.65□□□□□ -0.54
MDH1-201ENST00000233114 CTNNA3Q9UI47 895 aa11.65□□□□□ -0.54
MDH1-201ENST00000233114 TAF6LQ9Y6J9 622 aa11.65□□□□□ -0.54
MDH1-201ENST00000233114 GOLIM4O00461 696 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 RIMBP2O15034 1052 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 KDM4AO75164 1064 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 CAVIN2O95810 425 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 A1BGP04217 495 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 IFIT1P09914 478 aaKnown RBP11.65□□□□□ -0.55
MDH1-201ENST00000233114 EXOSC10Q01780 885 aaKnown RBP11.65□□□□□ -0.55
MDH1-201ENST00000233114 RESTQ13127 1097 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 MAP3K11Q16584 847 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 CCDC57Q2TAC2 916 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 RBM43Q6ZSC3 357 aaKnown RBP11.65□□□□□ -0.55
MDH1-201ENST00000233114 Q6ZUG5 572 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.55
MDH1-201ENST00000233114 SPATA32Q96LK8 384 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 CDHR2Q9BYE9 1310 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 NUP62CLQ9H1M0 184 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 CFAP45Q9UL16 551 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 MYH15Q9Y2K3 1946 aa11.65□□□□□ -0.55
MDH1-201ENST00000233114 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 GOLGA6L4A6NEF3 574 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
MDH1-201ENST00000233114 KIAA2012Q0VF49 1180 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 HSP90AB3PQ58FF7 597 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 CCDC158Q5M9N0 1113 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 1582.6 ms