RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 APBB1O00213 710 aa12.08□□□□□ -0.47
TTC1-201ENST00000231238 MMP16P51512 607 aa12.08□□□□□ -0.47
TTC1-201ENST00000231238 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.47
TTC1-201ENST00000231238 LIAT1Q6ZQX7 453 aa12.08□□□□□ -0.47
TTC1-201ENST00000231238 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.47
TTC1-201ENST00000231238 USP44Q9H0E7 712 aa12.08□□□□□ -0.47
TTC1-201ENST00000231238 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
TTC1-201ENST00000231238 GJA5P36382 358 aa12.08□□□□□ -0.48
TTC1-201ENST00000231238 NBPF14Q5TI25 921 aa12.08□□□□□ -0.48
TTC1-201ENST00000231238 NBPF10Q6P3W6 841 aaKnown RBP12.08□□□□□ -0.48
TTC1-201ENST00000231238 CHD1LQ86WJ1 897 aa12.08□□□□□ -0.48
TTC1-201ENST00000231238 SEPT12Q8IYM1 358 aa12.08□□□□□ -0.48
TTC1-201ENST00000231238 NBPF15Q8N660 670 aa12.08□□□□□ -0.48
TTC1-201ENST00000231238 LNPKQ9C0E8 428 aa12.08□□□□□ -0.48
TTC1-201ENST00000231238 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
TTC1-201ENST00000231238 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
TTC1-201ENST00000231238 ITGB4P16144 1822 aa12.07□□□□□ -0.48
TTC1-201ENST00000231238 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
TTC1-201ENST00000231238 C6orf229H3BNL8 230 aa12.07□□□□□ -0.48
TTC1-201ENST00000231238 GRM8O00222 908 aa12.07□□□□□ -0.48
TTC1-201ENST00000231238 NUCB1Q02818 461 aa12.07□□□□□ -0.48
TTC1-201ENST00000231238 RETREG3Q86VR2 466 aa12.07□□□□□ -0.48
TTC1-201ENST00000231238 SIRT2Q8IXJ6 389 aa12.07□□□□□ -0.48
TTC1-201ENST00000231238 LIMD1Q9UGP4 676 aa12.07□□□□□ -0.48
TTC1-201ENST00000231238 ATRNO75882 1429 aa12.07□□□□□ -0.48
TTC1-201ENST00000231238 PALLDQ8WX93 1383 aa12.06□□□□□ -0.48
TTC1-201ENST00000231238 LOC102724428A0A0B4J2F2 783 aa12.06□□□□□ -0.48
TTC1-201ENST00000231238 KCNQ2O43526 872 aa12.06□□□□□ -0.48
TTC1-201ENST00000231238 DXOO77932 396 aaKnown RBP12.06□□□□□ -0.48
TTC1-201ENST00000231238 NBPF7P0C2Y1 421 aaPredicted RBP12.06□□□□□ -0.48
TTC1-201ENST00000231238 SLC19A1P41440 591 aa12.06□□□□□ -0.48
TTC1-201ENST00000231238 SIK1P57059 783 aa12.06□□□□□ -0.48
TTC1-201ENST00000231238 ATP8B2P98198 1209 aa12.06□□□□□ -0.48
TTC1-201ENST00000231238 ZNF772Q68DY9 489 aaPredicted RBP12.06□□□□□ -0.48
TTC1-201ENST00000231238 TTLL7Q6ZT98 887 aa12.06□□□□□ -0.48
TTC1-201ENST00000231238 NEURL1BA8MQ27 555 aa12.05□□□□□ -0.48
TTC1-201ENST00000231238 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
TTC1-201ENST00000231238 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
TTC1-201ENST00000231238 CYP19A1P11511 503 aaPredicted RBP12.05□□□□□ -0.48
TTC1-201ENST00000231238 OS9Q13438 667 aaPredicted RBP12.05□□□□□ -0.48
TTC1-201ENST00000231238 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
TTC1-201ENST00000231238 GCKRQ14397 625 aa12.04□□□□□ -0.48
TTC1-201ENST00000231238 FAM182BQ5T319 152 aa12.04□□□□□ -0.48
TTC1-201ENST00000231238 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
TTC1-201ENST00000231238 CWC25Q9NXE8 425 aaPredicted RBP12.04□□□□□ -0.48
TTC1-201ENST00000231238 A0A087WZG4 1122 aa12.03□□□□□ -0.48
TTC1-201ENST00000231238 IGKV5-2P06315 115 aa12.03□□□□□ -0.48
TTC1-201ENST00000231238 HSP90AB3PQ58FF7 597 aa12.03□□□□□ -0.48
TTC1-201ENST00000231238 LRP10Q7Z4F1 713 aa12.03□□□□□ -0.48
TTC1-201ENST00000231238 PPP1R42Q7Z4L9 355 aa12.03□□□□□ -0.48
TTC1-201ENST00000231238 ZBTB1Q9Y2K1 713 aa12.03□□□□□ -0.48
TTC1-201ENST00000231238 GLI3P10071 1580 aa12.03□□□□□ -0.48
TTC1-201ENST00000231238 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.48
TTC1-201ENST00000231238 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.48
TTC1-201ENST00000231238 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.48
TTC1-201ENST00000231238 MTMR2Q13614 643 aa12.02□□□□□ -0.48
TTC1-201ENST00000231238 HSP90AB4PQ58FF6 505 aa12.02□□□□□ -0.48
TTC1-201ENST00000231238 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.48
TTC1-201ENST00000231238 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.48
TTC1-201ENST00000231238 EXOC6BQ9Y2D4 811 aa12.02□□□□□ -0.48
TTC1-201ENST00000231238 N4BP2Q86UW6 1770 aaPredicted RBP12.02□□□□□ -0.49
TTC1-201ENST00000231238 CRKLP46109 303 aaKnown RBP12.02□□□□□ -0.49
TTC1-201ENST00000231238 SPRYD7Q5W111 196 aa12.02□□□□□ -0.49
TTC1-201ENST00000231238 DZIP3Q86Y13 1208 aaKnown RBP12.02□□□□□ -0.49
TTC1-201ENST00000231238 CCDC191Q8NCU4 936 aa12.02□□□□□ -0.49
TTC1-201ENST00000231238 SUCLG2Q96I99 432 aa12.02□□□□□ -0.49
TTC1-201ENST00000231238 LRRCC1Q9C099 1032 aa12.02□□□□□ -0.49
TTC1-201ENST00000231238 CHMP3Q9Y3E7 222 aa12.02□□□□□ -0.49
TTC1-201ENST00000231238 RBM19Q9Y4C8 960 aaKnown RBP12.02□□□□□ -0.49
TTC1-201ENST00000231238 THSD7AQ9UPZ6 1657 aa12.01□□□□□ -0.49
TTC1-201ENST00000231238 MAP3K15Q6ZN16 1313 aa12.01□□□□□ -0.49
TTC1-201ENST00000231238 JUNDP17535 347 aa12.01□□□□□ -0.49
TTC1-201ENST00000231238 RBM6P78332 1123 aaKnown RBP12.01□□□□□ -0.49
TTC1-201ENST00000231238 CSPP1Q1MSJ5 1256 aa12.01□□□□□ -0.49
TTC1-201ENST00000231238 KRT27Q7Z3Y8 459 aa12.01□□□□□ -0.49
TTC1-201ENST00000231238 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
TTC1-201ENST00000231238 POLR3EQ9NVU0 708 aa12.01□□□□□ -0.49
TTC1-201ENST00000231238 SMARCA5O60264 1052 aaPredicted RBP12□□□□□ -0.49
TTC1-201ENST00000231238 RAB11FIP3O75154 756 aa12□□□□□ -0.49
TTC1-201ENST00000231238 TCIRG1Q13488 830 aa12□□□□□ -0.49
TTC1-201ENST00000231238 QPCTQ16769 361 aa12□□□□□ -0.49
TTC1-201ENST00000231238 RTL5Q5HYW3 569 aaPredicted RBP12□□□□□ -0.49
TTC1-201ENST00000231238 FAM196AQ6ZSG2 479 aa12□□□□□ -0.49
TTC1-201ENST00000231238 PRR7Q8TB68 274 aa12□□□□□ -0.49
TTC1-201ENST00000231238 SSH3Q8TE77 659 aa12□□□□□ -0.49
TTC1-201ENST00000231238 JARID2Q92833 1246 aaPredicted RBP12□□□□□ -0.49
TTC1-201ENST00000231238 BACH2Q9BYV9 841 aa12□□□□□ -0.49
TTC1-201ENST00000231238 BICC1Q9H694 974 aaKnown RBP12□□□□□ -0.49
TTC1-201ENST00000231238 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
TTC1-201ENST00000231238 TBC1D2BQ9UPU7 963 aa12□□□□□ -0.49
TTC1-201ENST00000231238 UTYO14607 1347 aa11.99□□□□□ -0.49
TTC1-201ENST00000231238 G3BP1Q13283 466 aaKnown RBP eCLIP11.99□□□□□ -0.49
TTC1-201ENST00000231238 ITPK1Q13572 414 aa11.99□□□□□ -0.49
TTC1-201ENST00000231238 ERC1Q8IUD2 1116 aa11.99□□□□□ -0.49
TTC1-201ENST00000231238 UPF2Q9HAU5 1272 aaKnown RBP11.99□□□□□ -0.49
TTC1-201ENST00000231238 ARFGEF2Q9Y6D5 1785 aa11.98□□□□□ -0.49
TTC1-201ENST00000231238 GPTP24298 496 aa11.98□□□□□ -0.49
TTC1-201ENST00000231238 CLK2P49760 499 aaKnown RBP11.98□□□□□ -0.49
TTC1-201ENST00000231238 TUSC1Q2TAM9 212 aa11.98□□□□□ -0.49
TTC1-201ENST00000231238 IRX2Q9BZI1 471 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms