RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 PhexP70669 749 aa9.2□□□□□ -0.94
Spen-201ENSMUST00000078886 Ptpn14Q62130 1189 aa9.2□□□□□ -0.94
Spen-201ENSMUST00000078886 Sf3a3Q9D554 501 aaKnown RBP9.2□□□□□ -0.94
Spen-201ENSMUST00000078886 Q4VA45 678 aa9.2□□□□□ -0.94
Spen-201ENSMUST00000078886 ChkbO55229 394 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Ppp1r15aP17564 657 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 VeztQ3ZK22 780 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Znf394Q9Z1D9 521 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 RcvrnP34057 202 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Hand2Q61039 217 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Rcn2Q8BP92 320 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Oas2E9Q9A9 742 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Gm10378F6XQQ1 160 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Plcb3P51432 1234 aaKnown RBP9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Sycp2lA0A0M3U1B0 842 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Larp6Q8BN59 492 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Frat2Q8K025 231 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Bloc1s4Q8VED2 215 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 EnahQ03173 802 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Luc7l2Q7TNC4 392 aaKnown RBP9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 U2af1l4Q8BGJ9 220 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Serpinc1P32261 465 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 RbsnQ80Y56 783 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Wdr3Q8BHB4 942 aaKnown RBP9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Clasp2Q8BRT1 1286 aaKnown RBP9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Nphp3Q7TNH6 1325 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Lekr1B2RVN1 116 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Dync1i2O88487 612 aaKnown RBP9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Tmem266Q8BZB3 538 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Eif3bQ8JZQ9 803 aaKnown RBP9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 NgdnQ9DB96 315 aaKnown RBP9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Fam186bD3Z420 943 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Myo1bP46735 1107 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Satb1Q60611 764 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Trim6Q8BGE7 488 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Clcn1Q64347 994 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Jade3Q6IE82 823 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Dnajc8Q6NZB0 253 aaKnown RBP9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Haus2Q9CQS9 234 aa9.19□□□□□ -0.94
Spen-201ENSMUST00000078886 Nap1l4Q78ZA7 375 aaKnown RBP9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Psmb7P70195 277 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Ccdc162pQ0VG85 912 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Gngt1Q61012 74 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Faf1P54731 649 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Mctp2Q5RJH2 878 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Itgb1bp2Q9R000 350 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Dnajc21E9Q8D0 531 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Daam2Q80U19 1115 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Triml1Q8BVP1 470 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Ppfia3P60469 1194 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Atp1a2Q6PIE5 1020 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Ttc1Q91Z38 292 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Tmem87bQ8BKU8 555 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Ift122Q6NWV3 1182 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Ints8Q80V86 995 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 ApobrQ8VBT6 942 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Wdr46Q9Z0H1 622 aaKnown RBP9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Ror2Q9Z138 944 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Sun3Q5SS91 320 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Mtmr7Q9Z2C9 660 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 TchhA0A0B4J1F9 1599 aa9.18□□□□□ -0.94
Spen-201ENSMUST00000078886 Snd1Q78PY7 910 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Haus1Q8BHX1 278 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Pacsin2Q9WVE8 486 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Speer3W4VSP1 261 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Top2bQ64511 1612 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Ccdc40Q8BI79 1192 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Ccdc175E9PVB3 822 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Pck1Q9Z2V4 622 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 MycnP03966 462 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 RpsaP14206 295 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Ppp1r10Q80W00 888 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Nucb1Q02819 459 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Tshz2Q68FE9 1030 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 CacybpQ9CXW3 229 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Slx4ipQ9D7Y9 413 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Abt1Q9QYL7 269 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Actr5Q80US4 605 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Rad50P70388 1312 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Ncoa1P70365 1447 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Zmym4A2A791 1549 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Eef2P58252 858 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Cetn3O35648 167 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Cracr2aQ3UP38 310 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Tubb2aQ7TMM9 445 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Ppp1r12bQ8BG95 976 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Bzw2Q91VK1 419 aaKnown RBP9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Tubb2bQ9CWF2 445 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Tdo2P48776 406 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Nlrp4cQ3TKR3 982 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Il16O54824 1322 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Pet2A2AHY8 747 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Ift81O35594 676 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 Ano1Q8BHY3 960 aa9.17□□□□□ -0.94
Spen-201ENSMUST00000078886 CltaO08585 235 aa9.16□□□□□ -0.94
Spen-201ENSMUST00000078886 Pdia3P27773 505 aaKnown RBP9.16□□□□□ -0.94
Spen-201ENSMUST00000078886 Frat1P70339 274 aa9.16□□□□□ -0.94
Spen-201ENSMUST00000078886 MpndQ3TV65 487 aa9.16□□□□□ -0.94
Spen-201ENSMUST00000078886 Asic3Q6X1Y6 530 aa9.16□□□□□ -0.94
Spen-201ENSMUST00000078886 Ttc12Q8BW49 704 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms