RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Igfbp6P47880 238 aa22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Anks1aP59672 1150 aa22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Ddx46Q569Z5 1032 aaKnown RBP22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 NfkbibQ60778 359 aa22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Fnbp4Q6ZQ03 1031 aa22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Rgs12Q8CGE9 1381 aa22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Ubr2Q6WKZ8 1755 aa22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Pms1Q8K119 917 aa22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Ddx41Q91VN6 622 aaKnown RBP22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Zkscan5Q9Z1D8 819 aa22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 FocadA2AKG8 1798 aa22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Tns2Q8CGB6 1400 aa22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 CrklP47941 303 aa22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 LyarQ08288 388 aaKnown RBP22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 OptnQ8K3K8 584 aa22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Dusp10Q9ESS0 483 aa22.22■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Npc1l1Q6T3U4 1333 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Prl3d3A0A0M6L0J6 224 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Cfap99A0A140LIX9 648 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Ttll7A4Q9F0 912 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Rgs9O54828 675 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 AppP12023 770 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 TfrcQ62351 763 aaKnown RBP22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 CrebrfQ8CDG5 640 aaKnown RBP22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Chrna2Q91X60 512 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Rdm1Q9CQK3 281 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Lrp6O88572 1613 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 AtrnQ9WU60 1428 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Abca3Q8R420 1704 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Fsd1Q7TPM6 496 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 MypopQ8R4U1 393 aa22.21■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Surf1P09925 306 aa22.2■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Mctp2Q5RJH2 878 aa22.2■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Ifit1Q64282 463 aa22.2■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Fkbp5Q64378 456 aa22.2■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 RgmbQ7TQ33 436 aa22.2■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Tnks1bp1P58871 1720 aa22.2■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Atp2b1G5E829 1220 aa22.19■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Soga3Q6NZL0 945 aa22.19■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Tubb4aQ9D6F9 444 aa22.19■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Jakmip2D3YXK0 820 aa22.19■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Ccdc121E9Q6D3 323 aa22.19■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Lmod3E9QA62 571 aa22.19■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Sult6b1P0CC03 303 aa22.19■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Prkab2Q6PAM0 271 aa22.19■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Ccdc82Q6PG04 518 aa22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Nxf7Q80SZ6 620 aaKnown RBP22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 NmiO35309 314 aa22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Frat1P70339 274 aa22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Cct2P80314 535 aaKnown RBP22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Dhx38Q80X98 1228 aa22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Tmc2Q8R4P4 888 aa22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Hnrnpul1Q8VDM6 859 aaKnown RBP22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Ankrd1Q9CR42 319 aa22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Cnpy2Q9QXT0 182 aa22.18■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Usp42B2RQC2 1324 aaKnown RBP22.17■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Ap5z1Q3U829 807 aa22.17■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Panx2Q6IMP4 677 aa22.17■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Arid5bQ8BM75 1188 aaKnown RBP22.17■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Golim4Q8BXA1 655 aa22.17■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Tmem266Q8BZB3 538 aa22.17■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Nop2Q922K7 793 aaKnown RBP22.17■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Yeats4Q9CR11 227 aaKnown RBP22.17■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 FosbP13346 338 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Mtx1P47802 317 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Hspd1P63038 573 aaKnown RBP22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Cypt2Q6P924 180 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Fez2Q6TYB5 348 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Fam102bQ8BQS4 339 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 AidaQ8C4Q6 305 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Cdc45Q9Z1X9 566 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Paxbp1P58501 919 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 ZyxQ62523 564 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Atp1a3Q6PIC6 1013 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Fam43aQ8BUP8 424 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Golph3lQ8R088 285 aaKnown RBP22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Krt25Q8VCW2 446 aa22.16■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Plekhd1B2RPU2 505 aa22.15■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Jarid2Q62315 1234 aa22.15■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Mei1Q9D4I2 1268 aa22.15■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Hap1O35668 628 aa22.15■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 NpeppsQ11011 920 aa22.15■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Gsdma2Q32M21 443 aa22.15■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 Odf2lQ9D478 642 aa22.15■■□□□ 1.14
Ccdc50-201ENSMUST00000039443 XpcP51612 930 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Cep63Q3UPP8 700 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Smc4Q8CG47 1286 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Flad1Q8R123 492 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Luzp1Q8R4U7 1068 aaKnown RBP22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Stk38Q91VJ4 465 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ppil4Q9CXG3 492 aaKnown RBP22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 4930548H24RikQ9D496 437 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ccdc129Q14B48 1034 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Sox30Q8CGW4 782 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Terf2ipQ91VL8 393 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ssfa2Q922B9 1252 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ppp4r3bQ922R5 820 aa22.14■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Sall1Q9ER74 1322 aa22.13■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ythdc1E9Q5K9 736 aaKnown RBP22.13■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 TrhQ62361 256 aa22.13■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 518 ms