RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	TMEM220	Q6QAJ8	160 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	FAM151B	Q6UXP7	276 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	SHISA6	Q6ZSJ9	500 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	EIF3M	Q7L2H7	374 aa	Known RBP	4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	C2orf73	Q8N5S3	287 aa	Predicted RBP	4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	OR13C4	Q8NGS5	318 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	ZPLD1	Q8TCW7	415 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	OLFM3	Q96PB7	478 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	RNF157	Q96PX1	679 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	PANX2	Q96RD6	677 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	SH3GL1	Q99961	368 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	MFF	Q9GZY8	342 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	ING2	Q9H160	280 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	VCX3B	Q9H321	246 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	FOLH1B	Q9HBA9	442 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	VCX3A	Q9NNX9	186 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	MIEF1	Q9NQG6	463 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	IMP3	Q9NV31	184 aa	Known RBP	4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	THUMPD1	Q9NXG2	353 aa	Known RBP	4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	C15orf41	Q9Y2V0	281 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	ARL5A	Q9Y689	179 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	CREBBP	Q92793	2442 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	ANKRD17	O75179	2603 aa	Known RBP	4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	POLQ	O75417	2590 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	MYO7B	Q6PIF6	2116 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	HIVEP1	P15822	2718 aa		4.28	□□□□□ -1.72
NRXN1-223	ENST00000625891	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	CPAMD8	Q8IZJ3	1885 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	IGHV7-81	A0A0B4J1V7	117 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	LOC285095	A0A1B0GVY8	99 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	OR51F1	A6NGY5	319 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	VSTM2B	A6NLU5	285 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	LOC110117498-PIK3R3	F6TDL0	507 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	HSD17B6	O14756	317 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	LSM1	O15116	133 aa	Known RBP	4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	KLF7	O75840	302 aa	Predicted RBP	4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	PROSC	O94903	275 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	CDK14	O94921	469 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	GAPDH	P04406	335 aa	Known RBP	4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891		P04436	131 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	SLC35E2	P0CK97	266 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	STAG3L3	P0CL85	134 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	RALB	P11234	206 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	ZNF30	P17039	623 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	VDAC1	P21796	283 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	HTR1F	P30939	366 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	RRM2	P31350	389 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	HSPA9	P38646	679 aa	Known RBP	4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	RAB9A	P51151	201 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	GNGT1	P63211	74 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	XIAP	P98170	497 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	TGFBI	Q15582	683 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	PRR4	Q16378	134 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	LRRC36	Q1X8D7	754 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	PAGE2B	Q5JRK9	111 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	CCDC122	Q5T0U0	273 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	SPINK14	Q6IE38	97 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	CCDC121	Q6ZUS5	278 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	ACOT7L	Q6ZUV0	252 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	TRAPPC5	Q8IUR0	188 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	SKA3	Q8IX90	412 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	ZNF567	Q8N184	647 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	LYG1	Q8N1E2	194 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	TRAM1L1	Q8N609	369 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	TPRX1	Q8N7U7	411 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	SDR9C7	Q8NEX9	313 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	OR4E2	Q8NGC2	313 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	OR9A1P	Q8NGU1	263 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	LKAAEAR1	Q8TD35	194 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	SLC35B4	Q969S0	331 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	KIAA1143	Q96AT1	154 aa	Predicted RBP	4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	ZNF514	Q96K75	400 aa	Predicted RBP	4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	CATSPER2	Q96P56	530 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	KCNA7	Q96RP8	456 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	MBOAT4	Q96T53	435 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	C20orf24	Q9BUV8	137 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	SELENOI	Q9C0D9	397 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	HRASLS2	Q9NWW9	162 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	IL17C	Q9P0M4	197 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	DHCR7	Q9UBM7	475 aa	Known RBP	4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	FARSA	Q9Y285	508 aa	Known RBP	4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	NF1	P21359	2839 aa		4.27	□□□□□ -1.73
NRXN1-223	ENST00000625891	MKRN2OS	H3BPM6	223 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	C19orf84	I3L1E1	186 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	WWP2	O00308	870 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	DCTN6	O00399	190 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	KMO	O15229	486 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	SOX15	O60248	233 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	SRSF10	O75494	262 aa	Known RBP	4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	H6PD	O95479	791 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	LGI1	O95970	557 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	IGLL1	P15814	213 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	ZP3	P21754	424 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	XRCC4	Q13426	336 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	PIGH	Q14442	188 aa	Predicted RBP	4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	AANAT	Q16613	207 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	CCSMST1	Q4G0I0	132 aa		4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	PAN3	Q58A45	887 aa	Known RBP	4.26	□□□□□ -1.73
NRXN1-223	ENST00000625891	OR2B11	Q5JQS5	317 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms