RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 OSGIN2Q9Y236 505 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 PCM1Q15154 2024 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 SPAG17Q6Q759 2223 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 FAM221AA4D161 298 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 CEACAM5P06731 702 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 CTRB1P17538 263 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 CTRB2Q6GPI1 263 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 RPP25Q9BUL9 199 aaKnown RBP17.44■□□□□ 0.38
SUDS3-204ENST00000543473 RAB18Q9NP72 206 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 MBD1Q9UIS9 605 aaPredicted RBP17.44■□□□□ 0.38
SUDS3-204ENST00000543473 GUSBP08236 651 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 QDPRP09417 244 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 ACKR3P25106 362 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 INPP5JQ15735 1006 aaPredicted RBP17.44■□□□□ 0.38
SUDS3-204ENST00000543473 LHX4Q969G2 390 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 PLEKHF2Q9H8W4 249 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 MMP25Q9NPA2 562 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 MBTPS2O43462 519 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 NKX2-2O95096 273 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 DUS4LO95620 317 aaKnown RBP17.43■□□□□ 0.38
SUDS3-204ENST00000543473 RAB32Q13637 225 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 OR6S1Q8NH40 331 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF707Q96C28 371 aaPredicted RBP17.43■□□□□ 0.38
SUDS3-204ENST00000543473 KNTC1P50748 2209 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 FOLR3P41439 243 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 VWA2Q5GFL6 755 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 ETFBKMTQ8IXQ9 262 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 TMEM18Q96B42 140 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 BORCS7Q96B45 105 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 CMBLQ96DG6 245 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 MAGT1Q9H0U3 335 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 FBXO34Q9NWN3 711 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 GPR160Q9UJ42 338 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 ATAD5Q96QE3 1844 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 RNF4P78317 190 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 PNLIPRP3Q17RR3 467 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 TCTN1Q2MV58 587 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 THEM4Q5T1C6 240 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 THNSL2Q86YJ6 484 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 RPUSD4Q96CM3 377 aaKnown RBP17.43■□□□□ 0.38
SUDS3-204ENST00000543473 KTI12Q96EK9 354 aaPredicted RBP17.43■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF251Q9BRH9 671 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 TNS1Q9HBL0 1735 aaKnown RBP17.43■□□□□ 0.38
SUDS3-204ENST00000543473 GDF1P27539 372 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 TRIM61Q5EBN2 209 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 DMRTC1Q5HYR2 192 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 BATF2Q8N1L9 274 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 C15orf54Q8N8G6 183 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 LINC01555Q8NAE3 123 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 NT5CQ8TCD5 201 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 SMIM7Q9BQ49 75 aa17.43■□□□□ 0.38
SUDS3-204ENST00000543473 HOXA1P49639 335 aaPredicted RBP17.42■□□□□ 0.38
SUDS3-204ENST00000543473 ABHD17BQ5VST6 288 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 TFAP2EQ6VUC0 442 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 OR4C3Q8NH37 302 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 DNAJB11Q9UBS4 358 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 FPR2P25090 351 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF273Q14593 569 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF787Q6DD87 383 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 FAM185AQ8N0U4 392 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 UBAC2Q8NBM4 344 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 TEX101Q9BY14 249 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 ABHD16AO95870 558 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 CLEC12BQ2HXU8 276 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 DMBX1Q8NFW5 382 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 UBL7Q96S82 380 aaPredicted RBP17.42■□□□□ 0.38
SUDS3-204ENST00000543473 A6NCN8 305 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 PRAMEF25A6NGN4 478 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 NMBP08949 121 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 FABP4P15090 132 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 CDKN2AP42771 156 aaKnown RBP17.42■□□□□ 0.38
SUDS3-204ENST00000543473 AGBL5Q8NDL9 886 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 CA10Q9NS85 328 aa17.42■□□□□ 0.38
SUDS3-204ENST00000543473 GDF2Q9UK05 429 aaPredicted RBP17.42■□□□□ 0.38
SUDS3-204ENST00000543473 SCRG1O75711 98 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 PRSS54Q6PEW0 395 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 AKR7LQ8NHP1 331 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 RNF150Q9ULK6 438 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 IGHV3-20A0A0C4DH32 117 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 G3V3Y1 287 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 CALCRP30988 508 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF808Q8N4W9 903 aaPredicted RBP17.41■□□□□ 0.38
SUDS3-204ENST00000543473 SLC25A43Q8WUT9 341 aaPredicted RBP17.41■□□□□ 0.38
SUDS3-204ENST00000543473 CDK2AP1O14519 115 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 ENDOGQ14249 297 aaKnown RBP17.41■□□□□ 0.38
SUDS3-204ENST00000543473 FAM199XQ6PEV8 388 aaPredicted RBP17.41■□□□□ 0.38
SUDS3-204ENST00000543473 C22orf15Q8WYQ4 148 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 OPA3Q9H6K4 179 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 GHRLQ9UBU3 117 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 PISDQ9UG56 409 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 SERPINE3A8MV23 424 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 SFT2D2O95562 160 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF813Q6ZN06 617 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 OR51F2Q8NH61 342 aa17.41■□□□□ 0.38
SUDS3-204ENST00000543473 SAT2Q96F10 170 aaPredicted RBP17.41■□□□□ 0.38
SUDS3-204ENST00000543473 DNAJB12Q9NXW2 375 aaKnown RBP17.41■□□□□ 0.38
SUDS3-204ENST00000543473 M0R135 149 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 PLRG1O43660 514 aaKnown RBP17.4■□□□□ 0.38
SUDS3-204ENST00000543473 ATOH1Q92858 354 aaPredicted RBP17.4■□□□□ 0.38
SUDS3-204ENST00000543473 MSI2Q96DH6 328 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms