RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 OR5K1Q8NHB7 308 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 THEM6Q8WUY1 208 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 RAB40AQ8WXH6 277 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 DACT3Q96B18 629 aaPredicted RBP14.24□□□□□ -0.13
SQLE-205ENST00000521232 OR8B2Q96RD0 313 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 JMJD8Q96S16 334 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 MRI1Q9BV20 369 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 SUCNR1Q9BXA5 334 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 OR10A2Q9H208 303 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 MMADHCQ9H3L0 296 aaPredicted RBP14.24□□□□□ -0.13
SQLE-205ENST00000521232 RGCCQ9H4X1 137 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 TVP23BQ9NYZ1 205 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 DNAJC27Q9NZQ0 273 aa14.24□□□□□ -0.13
SQLE-205ENST00000521232 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.23□□□□□ -0.13
SQLE-205ENST00000521232 hCG_38984A0A1B0GV85 526 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 TNFRSF13BO14836 293 aaPredicted RBP14.23□□□□□ -0.13
SQLE-205ENST00000521232 RGS9O75916 674 aaPredicted RBP14.23□□□□□ -0.13
SQLE-205ENST00000521232 PPIAL4GP0DN37 164 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 ALOX5APP20292 161 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 ESRRGP62508 458 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 PTGES3Q15185 160 aaKnown RBP14.23□□□□□ -0.13
SQLE-205ENST00000521232 SNAPC1Q16533 368 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 KLF17Q5JT82 389 aaPredicted RBP14.23□□□□□ -0.13
SQLE-205ENST00000521232 LRRN1Q6UXK5 716 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 ZNF841Q6ZN19 808 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 BPIFB2Q8N4F0 458 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.23□□□□□ -0.13
SQLE-205ENST00000521232 C19orf18Q8NEA5 215 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 TEAD3Q99594 435 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 SLC6A7Q99884 636 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 C14orf119Q9NWQ9 140 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 KIF17Q9P2E2 1029 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 NUP50Q9UKX7 468 aa14.23□□□□□ -0.13
SQLE-205ENST00000521232 IGHV2-70DA0A0C4DH43 119 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 KIR2DS1A0A191URI9 304 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 LGALS8O00214 317 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 LHBP01229 141 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 GRPP07492 148 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 PITPNBP48739 271 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 GSK3AP49840 483 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 RPS7P62081 194 aaKnown RBP14.22□□□□□ -0.13
SQLE-205ENST00000521232 HOXA4Q00056 320 aaPredicted RBP14.22□□□□□ -0.13
SQLE-205ENST00000521232 APOFQ13790 326 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 KCNJ8Q15842 424 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 ATP6AP1Q15904 470 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 WDR25Q64LD2 544 aaPredicted RBP14.22□□□□□ -0.13
SQLE-205ENST00000521232 BTNL3Q6UXE8 466 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 C11orf53Q8IXP5 236 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 FAM216AQ8WUB2 273 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 DUS3LQ96G46 650 aaKnown RBP14.22□□□□□ -0.13
SQLE-205ENST00000521232 PGAM5Q96HS1 289 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 NIPAL2Q9H841 368 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 BRD7Q9NPI1 651 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 C1orf123Q9NWV4 160 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 CLN8Q9UBY8 286 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 KLHDC2Q9Y2U9 406 aa14.22□□□□□ -0.13
SQLE-205ENST00000521232 G3V2T6 193 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 TRIM77I1YAP6 450 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 PHYHO14832 338 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 NDUFA2O43678 99 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 NAA10P41227 235 aaPredicted RBP14.21□□□□□ -0.13
SQLE-205ENST00000521232 NPY4RP50391 375 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 EFNB1P98172 346 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 OR8B8Q15620 311 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 ARMCX4Q5H9R4 360 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 SFRP4Q6FHJ7 346 aaPredicted RBP14.21□□□□□ -0.13
SQLE-205ENST00000521232 DEGS2Q6QHC5 323 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 ZNF826PQ6ZT77 177 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 GCSAMQ8N6F7 178 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 CSNK2A3Q8NEV1 391 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 OR8S1Q8NH09 359 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 C22orf15Q8WYQ4 148 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 YIPF3Q9GZM5 350 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 TRIM36Q9NQ86 728 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 LAMP5Q9UJQ1 280 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 AP4S1Q9Y587 144 aa14.21□□□□□ -0.13
SQLE-205ENST00000521232 TRAV38-1A0A0B4J264 116 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 CCDC182A6NF36 153 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 OOEPA6NGQ2 149 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 C3orf80F5H4A9 247 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 FASP25445 335 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 HCCSP53701 268 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 SNCBQ16143 134 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 KRT77Q7Z794 578 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 WDR86Q86TI4 376 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 ZDHHC22Q8N966 263 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 BOLLQ8N9W6 283 aaKnown RBP14.2□□□□□ -0.14
SQLE-205ENST00000521232 OR1M1Q8NGA1 313 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 UPRTQ96BW1 309 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 PPP1R3EQ9H7J1 279 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 RNPEPL1Q9HAU8 725 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 ESM1Q9NQ30 184 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 ZNF69Q9UC07 566 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 ZNF391Q9UJN7 358 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 RHBDD3Q9Y3P4 386 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 LRP12Q9Y561 859 aa14.2□□□□□ -0.14
SQLE-205ENST00000521232 ACOD1A6NK06 481 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 A6NLC8 198 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 PRKYO43930 277 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 PSMA6P60900 246 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms