RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 B4GALT5O43286 388 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 SLC22A5O76082 557 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 CXCR1P25024 350 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 SPAM1P38567 509 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 NOVP48745 357 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 RPL23P62829 140 aaKnown RBP3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 RAP1AP62834 184 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 CACNG7P62955 275 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 MADCAM1Q13477 382 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 USF2Q15853 346 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 TAL2Q16559 108 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 DEGS2Q6QHC5 323 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 LINC01551Q86U37 167 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 SLC30A8Q8IWU4 369 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 ZNF786Q8N393 782 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 GPR26Q8NDV2 337 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 OR6N1Q8NGY5 312 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 CPB2Q96IY4 423 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 HSD17B10Q99714 261 aaKnown RBP3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 SULT4A1Q9BR01 284 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 SLC17A9Q9BYT1 436 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 OR52A5Q9H2C5 316 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 C12orf10Q9HB07 376 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 FBXO8Q9NRD0 319 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 RMND1Q9NWS8 449 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 VAPAQ9P0L0 249 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 ZNF229Q9UJW7 825 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 CFL2Q9Y281 166 aa3.48□□□□□ -1.85
HMGB1P47-201ENST00000511281 SEC14L6B5MCN3 397 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 KRBOX1C9JBD0 128 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 REM1O75628 298 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 OR5AL1P0C617 328 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 ZNF823P16415 610 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 DRD3P35462 400 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 ARR3P36575 388 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 POLR2IP36954 125 aaKnown RBP3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 TNNC1P63316 161 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 CRADDP78560 199 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 CA13Q8N1Q1 262 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 TCAIMQ8N3R3 496 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 OR6K2Q8NGY2 324 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 ZFAND1Q8TCF1 268 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 EMC6Q9BV81 110 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 PORCNQ9H237 461 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 ARV1Q9H2C2 271 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 VCX3AQ9NNX9 186 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 VAX2Q9UIW0 290 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 TBX21Q9UL17 535 aa3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 TSSC4Q9Y5U2 329 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P47-201ENST00000511281 IGLV4-69A0A075B6H9 119 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 SMIM26A0A096LP01 95 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 RAB19A4D1S5 217 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 GOLGA8JA6NMD2 632 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZNF593O00488 134 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 PSPHP1O15172 72 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 SC5DO75845 299 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 SMC2O95347 1197 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 CST4P01036 141 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 GOLGA8HP0CJ92 632 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 PCK1P35558 622 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 DEKP35659 375 aaKnown RBP3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 GGT2P36268 569 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 P2RY2P41231 377 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 DNASE1L1P49184 302 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 TAS2R46P59540 309 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 SLC35A1P78382 337 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 PPIDQ08752 370 aaKnown RBP3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 PNOCQ13519 176 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 GPR176Q14439 515 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 MAD2L1BPQ15013 274 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 TNXAQ16473 311 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 NDUFAF6Q330K2 333 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 FBXW9Q5XUX1 488 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 SLC16A13Q7RTY0 426 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 Q8N7P7 452 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 COQ8AQ8NI60 647 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 CDKL2Q92772 493 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 ATP6V1G3Q96LB4 118 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 GABRG3Q99928 467 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 KCNS3Q9BQ31 491 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 TMEM243Q9BU79 118 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 PRRG3Q9BZD7 231 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 OR52D1Q9H346 318 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZDHHC4Q9NPG8 344 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZNRD1Q9P1U0 126 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 TFR2Q9UP52 801 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 HES2Q9Y543 173 aa3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 EIF4G1Q04637 1599 aaKnown RBP3.46□□□□□ -1.86
HMGB1P47-201ENST00000511281 MAP3K19Q56UN5 1328 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 GPATCH8Q9UKJ3 1502 aaKnown RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 IGKV1-27A0A075B6S5 117 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 RSPH10B2B2RC85 870 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 POLR3GO15318 223 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZNF207O43670 478 aaKnown RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 GLSO94925 669 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 TRBV12-3P01733 135 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 SLC35G6P0C7Q6 338 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 RSPH10BP0C881 870 aa3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 RPS9P46781 194 aaKnown RBP3.45□□□□□ -1.86
HMGB1P47-201ENST00000511281 PPOXP50336 477 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms