RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TEX47Q8TBZ9 253 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 TAF15Q92804 592 aaKnown RBP eCLIP17.46■□□□□ 0.39
VSX1-206ENST00000444511 OTULINQ96BN8 352 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 NSL1Q96IY1 281 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 INTS14Q96SY0 518 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 ZNF696Q9H7X3 374 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 SMURF1Q9HCE7 757 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 CMC2Q9NRP2 79 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 TNFRSF13BO14836 293 aaPredicted RBP17.45■□□□□ 0.38
VSX1-206ENST00000444511 APOC1P02654 83 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 GRK5P34947 590 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 LINC01590Q5TEZ4 76 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 METTL11BQ5VVY1 283 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 RUSC1-AS1Q66K80 236 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 DPY19L4Q7Z388 723 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 FAM90A1Q86YD7 464 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 ERI1Q8IV48 349 aaKnown RBP17.45■□□□□ 0.38
VSX1-206ENST00000444511 TMIGD2Q96BF3 282 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 REEP6Q96HR9 211 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 WDFY2Q96P53 400 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 RASSF4Q9H2L5 321 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 PRDM13Q9H4Q3 707 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 MED20Q9H944 212 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 NOX4Q9NPH5 578 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 TNFRSF19Q9NS68 423 aa17.45■□□□□ 0.38
VSX1-206ENST00000444511 FAM183AA6NL82 134 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 SRRM5B3KS81 715 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 H3BN98 237 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 GSTT1P30711 240 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 FAM3AP98173 230 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 MS4A2Q01362 244 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 GFOD2Q3B7J2 385 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 FAM57BQ71RH2 274 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 OR52H1Q8NGJ2 320 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 RNF133Q8WVZ7 376 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 SGK3Q96BR1 496 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 LRGUKQ96M69 825 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 TBX15Q96SF7 602 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 NIPSNAP1Q9BPW8 284 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 ABHD6Q9BV23 337 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 MARCH7Q9H992 704 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 DNAJC27Q9NZQ0 273 aa17.44■□□□□ 0.38
VSX1-206ENST00000444511 MGAM2Q2M2H8 2515 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 IGHV3OR15-7A0A075B7D8 119 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 DVL1O14640 695 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 LHBP01229 141 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 CRYBA1P05813 215 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 MMP9P14780 707 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 MDKP21741 143 aaPredicted RBP17.43■□□□□ 0.38
VSX1-206ENST00000444511 OMGP23515 440 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 CFL1P23528 166 aaKnown RBP17.43■□□□□ 0.38
VSX1-206ENST00000444511 GNALP38405 381 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 POU4F2Q12837 409 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 TEX36Q5VZQ5 186 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 CD300LDQ6UXZ3 194 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 SHFQ7M4L6 423 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 IQCF1Q8N6M8 205 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 GIPC3Q8TF64 312 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 LRRC29Q8WV35 223 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 GATAD2BQ8WXI9 593 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 RNPEPL1Q9HAU8 725 aa17.43■□□□□ 0.38
VSX1-206ENST00000444511 CENPVL3A0A0U1RRI6 287 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 FAM181BA6NEQ2 426 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 WIPF1O43516 503 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 GLCEO94923 617 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 ECDO95905 644 aaPredicted RBP17.42■□□□□ 0.38
VSX1-206ENST00000444511 RAP2AP10114 183 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 PAICSP22234 425 aaKnown RBP17.42■□□□□ 0.38
VSX1-206ENST00000444511 ZNF121P58317 390 aaPredicted RBP17.42■□□□□ 0.38
VSX1-206ENST00000444511 GK3PQ14409 553 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 PDCD1Q15116 288 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 MICBQ29980 383 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 Q6YL49 198 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 BTN2A1Q7KYR7 527 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 WDR86Q86TI4 376 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 ST8SIA4Q92187 359 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 CCDC124Q96CT7 223 aaKnown RBP17.42■□□□□ 0.38
VSX1-206ENST00000444511 PGAM5Q96HS1 289 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 FAM71F1Q96KD3 344 aaPredicted RBP17.42■□□□□ 0.38
VSX1-206ENST00000444511 FEVQ99581 238 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 SLITRK2Q9H156 845 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 OR10A2Q9H208 303 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 BRD7Q9NPI1 651 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 KAAG1Q9UBP8 84 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 DOCK11Q5JSL3 2073 aa17.42■□□□□ 0.38
VSX1-206ENST00000444511 hCG_38984A0A1B0GV85 526 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 TIPRLO75663 272 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 CST1P01037 141 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 H2BFMP0C1H6 154 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 CALB2P22676 271 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 GSK3AP49840 483 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 ARF6P62330 175 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 C11orf91Q3C1V1 193 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 FIP1L1Q6UN15 594 aaKnown RBP17.41■□□□□ 0.38
VSX1-206ENST00000444511 RHOUQ7L0Q8 258 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 PRSS45Q7RTY3 260 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.41■□□□□ 0.38
VSX1-206ENST00000444511 FTMTQ8N4E7 242 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 CSNK2A3Q8NEV1 391 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 OR1M1Q8NGA1 313 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms