RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TXNIPQ9H3M7 391 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 SLCO1C1Q9NYB5 712 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 ACAD8Q9UKU7 415 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 FAM96BQ9Y3D0 163 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 PIGPP57054 158 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 DHODHQ02127 395 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 THNSL2Q86YJ6 484 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 BSCL2Q96G97 398 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-203ENST00000391813 CCDC187A0A096LP49 1063 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 HPXP02790 462 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 MMP7P09237 267 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-203ENST00000391813 APOBEC1P41238 236 aaKnown RBP17.78■□□□□ 0.44
SHANK1-203ENST00000391813 TPPP2P59282 170 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 DMWDQ09019 674 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 HAO2Q9NYQ3 351 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 PLRG1O43660 514 aaKnown RBP17.78■□□□□ 0.44
SHANK1-203ENST00000391813 FGF17O60258 216 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 CD22P20273 847 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 CBLN2Q8IUK8 224 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 NECAP1Q8NC96 275 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 SP7Q8TDD2 431 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-203ENST00000391813 TMEM9BQ9NQ34 198 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 HEYLQ9NQ87 328 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-203ENST00000391813 MED16Q9Y2X0 877 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 CTAG2O75638 210 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 PNPP00491 289 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 RBPJQ06330 500 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 DMKNQ6E0U4 476 aaPredicted RBP17.77■□□□□ 0.44
SHANK1-203ENST00000391813 AAED1Q7RTV5 226 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 OR4A16Q8NH70 328 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 ZNF707Q96C28 371 aaPredicted RBP17.77■□□□□ 0.44
SHANK1-203ENST00000391813 LAT2Q9GZY6 243 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 C9orf170A2RU37 121 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 SSSCA1O60232 199 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 WNT11O96014 354 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 ZNF528Q3MIS6 628 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 ZNF66Q6ZN08 573 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 CTSFQ9UBX1 484 aa17.77■□□□□ 0.44
SHANK1-203ENST00000391813 METTL12A8MUP2 240 aa17.77■□□□□ 0.43
SHANK1-203ENST00000391813 TOX4O94842 621 aa17.77■□□□□ 0.43
SHANK1-203ENST00000391813 GLI4P10075 376 aa17.77■□□□□ 0.43
SHANK1-203ENST00000391813 PTHLHP12272 177 aa17.77■□□□□ 0.43
SHANK1-203ENST00000391813 HSF1Q00613 529 aa17.77■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF687Q8N1G0 1237 aa17.77■□□□□ 0.43
SHANK1-203ENST00000391813 PINX1Q96BK5 328 aaKnown RBP17.77■□□□□ 0.43
SHANK1-203ENST00000391813 IGLV3-16A0A075B6K0 115 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 COX5AP20674 150 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 GCH1P30793 250 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF574Q6ZN55 896 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-203ENST00000391813 OR4S1Q8NGB4 309 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 SLC37A2Q8TED4 501 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 ADGRL4Q9HBW9 690 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 POLR2AP24928 1970 aaKnown RBP17.76■□□□□ 0.43
SHANK1-203ENST00000391813 A0A087X0M5 115 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 A0A1B0GX30 115 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 IGHA1P01876 353 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 CRYBA1P05813 215 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 BTG2P78543 158 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 B4GALNT1Q00973 533 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 HABP2Q14520 560 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-203ENST00000391813 FAM109BQ6ICB4 259 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-203ENST00000391813 A0A0A6YYD5 115 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 XRCC2O43543 280 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 SFT2D2O95562 160 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 RPS27P42677 84 aaKnown RBP17.76■□□□□ 0.43
SHANK1-203ENST00000391813 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.76■□□□□ 0.43
SHANK1-203ENST00000391813 TMEM65Q6PI78 240 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 C17orf47Q8NEP4 570 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 OR10J5Q8NHC4 309 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 FAM210BQ96KR6 192 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 CHST11Q9NPF2 352 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 CDK2AP1O14519 115 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 TUSC2O75896 110 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 SEMG1P04279 462 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 Q7L0L9 218 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 OTOSQ8NHW6 89 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 USB1Q9BQ65 265 aaKnown RBP17.76■□□□□ 0.43
SHANK1-203ENST00000391813 UCK1Q9HA47 277 aa17.76■□□□□ 0.43
SHANK1-203ENST00000391813 BCORP1Q8N888 145 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 OR51H1Q8NH63 302 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 VAMP8Q9BV40 100 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 ZDHHC11Q9H8X9 412 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 GPR84Q9NQS5 396 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 MBNL1Q9NR56 388 aaKnown RBP17.75■□□□□ 0.43
SHANK1-203ENST00000391813 CBY3A6NI87 242 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 NPIPB8E9PQR5 432 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 CD46P15529 392 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 TCN2P20062 427 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 THEM4Q5T1C6 240 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 KIRREL2Q6UWL6 708 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 MS4A7Q9GZW8 240 aaPredicted RBP17.75■□□□□ 0.43
SHANK1-203ENST00000391813 POU3F2P20265 443 aaPredicted RBP17.75■□□□□ 0.43
SHANK1-203ENST00000391813 OR2A2Q6IF42 318 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 SMIM15Q7Z3B0 74 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 CADM4Q8NFZ8 388 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 GHITMQ9H3K2 345 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 B9D1Q9UPM9 204 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF320A2RRD8 509 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 OR5K3A6NET4 321 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 MRPL33O75394 65 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms