RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ASAH2BP0C7U1 165 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 TFPIP10646 304 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 CLUP10909 449 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 FOSL1P15407 271 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 ENPP1P22413 925 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 CRYGSP22914 178 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 CXCR1P25024 350 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 ADAM8P78325 824 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 DGCR2P98153 550 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 DHODHQ02127 395 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 POU4F3Q15319 338 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 GLT8D1Q68CQ7 371 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 DNM1P34Q6PK57 102 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 GLDNQ6ZMI3 551 aaPredicted RBP9.11□□□□□ -0.95
COL5A1-202ENST00000371820 STAC2Q6ZMT1 411 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 IDO2Q6ZQW0 420 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 GLB1L2Q8IW92 636 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 PIAS4Q8N2W9 510 aaPredicted RBP9.11□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF433Q8N7K0 673 aaPredicted RBP9.11□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF676Q8N7Q3 588 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 SYNPRQ8TBG9 265 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 SUN5Q8TC36 379 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 ABHD3Q8WU67 409 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 GIMAP1Q8WWP7 306 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 ROBO4Q8WZ75 1007 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 WFIKKN1Q96NZ8 548 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 OR14A2Q96R54 314 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 NMNAT3Q96T66 252 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 KLHDC3Q9BQ90 382 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 SRXN1Q9BYN0 137 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 SCPEP1Q9HB40 452 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 EIF3KQ9UBQ5 218 aaKnown RBP9.11□□□□□ -0.95
COL5A1-202ENST00000371820 CKLFQ9UBR5 152 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 GLS2Q9UI32 602 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 HDGFL3Q9Y3E1 203 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 MED12Q93074 2177 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 ABCA2Q9BZC7 2435 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 TRAV36DV7A0A075B6V5 113 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 TRBV5-7A0A0A0MS05 114 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 A0A1W2PNR3 127 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 OR6C68A6NDL8 312 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 BLOC1S5-TXNDC5H3BN57 136 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 SULT2B1O00204 365 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 EFNA2O43921 213 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 ICMTO60725 284 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF254O75437 659 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 OR2A4O95047 310 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 NDUFB6O95139 128 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 OR6A2O95222 327 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 PMS2P2O95744 297 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 CRYZL1O95825 349 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 GYPBP06028 91 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 CRABP1P29762 137 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 CCKARP32238 428 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 NAA10P41227 235 aaPredicted RBP9.1□□□□□ -0.95
COL5A1-202ENST00000371820 ACTBP60709 375 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 PSMA6P60900 246 aaKnown RBP9.1□□□□□ -0.95
COL5A1-202ENST00000371820 ERVK-25P63136 954 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 ACTG1P63261 375 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 RBMS2Q15434 407 aaKnown RBP9.1□□□□□ -0.95
COL5A1-202ENST00000371820 DEFB113Q30KQ7 82 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 BEX5Q5H9J7 111 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 CLVS2Q5SYC1 327 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 FAM27D1Q5T7N8 215 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 LINC01590Q5TEZ4 76 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 LIPNQ5VXI9 398 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 DEGS2Q6QHC5 323 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 TMPPEQ6ZT21 453 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 SSX8Q7RTT4 187 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 FAM122BQ7Z309 247 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 ELMOD2Q8IZ81 293 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 OR8H3Q8N146 312 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 LRRC75AQ8NAA5 344 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 STEAP2Q8NFT2 490 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 OR11H7Q8NGC8 314 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 LGALS14Q8TCE9 139 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 STK35Q8TDR2 534 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 PTX4Q96A99 478 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 DDIT4LQ96D03 193 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 OR2A7Q96R45 310 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF587Q96SQ5 575 aaPredicted RBP9.1□□□□□ -0.95
COL5A1-202ENST00000371820 INTS14Q96SY0 518 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 SLC25A21Q9BQT8 299 aaPredicted RBP9.1□□□□□ -0.95
COL5A1-202ENST00000371820 GSX2Q9BZM3 304 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 GSX1Q9H4S2 264 aaPredicted RBP9.1□□□□□ -0.95
COL5A1-202ENST00000371820 C12orf49Q9H741 205 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 PLEKHF2Q9H8W4 249 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 BCO1Q9HAY6 547 aa9.1□□□□□ -0.95
COL5A1-202ENST00000371820 MYOZ1Q9NP98 299 aaPredicted RBP9.1□□□□□ -0.95
COL5A1-202ENST00000371820 MPDZO75970 2070 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 A6NIZ1 184 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF724A8MTY0 619 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 H7C417 338 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 M0R233 179 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF593O00488 134 aaPredicted RBP9.09□□□□□ -0.95
COL5A1-202ENST00000371820 AKR7A2O43488 359 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 CYTIPO60759 359 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 UPK3AO75631 287 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 AKAIN1P0CW23 69 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 ALOX5APP20292 161 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms