RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 RALGAPA1Q6GYQ0 2036 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 SNAPINO95295 136 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 APOC1P02654 83 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 HEXBP07686 556 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 ZNF43P17038 809 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 MICBQ29980 383 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 SPIN3Q5JUX0 258 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 ZNF684Q5T5D7 378 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 AVPI1Q5T686 147 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 GPBAR1Q8TDU6 330 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 TMEM234Q8WY98 164 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 LRFN5Q96NI6 719 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 NECAB3Q96P71 396 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 HDHD3Q9BSH5 251 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 FGF21Q9NSA1 209 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 FAM86C1Q9NVL1 165 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 PLEKHJ1Q9NW61 149 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 FBXO7Q9Y3I1 522 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 URGCP-MRPS24S4R325 110 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 RAB27BO00194 218 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 CRYBA1P05813 215 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 OR13C7P0DN81 318 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 FCGR2AP12318 317 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 CAPZBP47756 277 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 ASPHD2Q6ICH7 369 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 ZDHHC12Q96GR4 267 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 LAT2Q9GZY6 243 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 S1PR5Q9H228 398 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 RHOFQ9HBH0 211 aa11.85□□□□□ -0.51
TNFRSF21-201ENST00000296861 TRBV11-1A0A0K0K1C0 115 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 C1QL1O75973 258 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 TSPAN15O95858 294 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 BGLAPP02818 100 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 FOLR1P15328 257 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 TLE1Q04724 770 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 MPPED2Q15777 294 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 C21orf62-AS1Q17RA5 79 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 UEVLDQ8IX04 471 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 OR5AP2Q8NGF4 316 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 RGCCQ9H4X1 137 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 PCOLCE2Q9UKZ9 415 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 AMDHD2Q9Y303 409 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 PUS1Q9Y606 427 aaKnown RBP eCLIP11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 TRAV20A0A0B4J274 112 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 PLPP3O14495 311 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 FAHP16930 419 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 ZNF121P58317 390 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 CLINT1Q14677 625 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 TAF9Q16594 264 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 SLC25A24Q6NUK1 477 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 Q6ZRG5 221 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 GRINAQ7Z429 371 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 DYRK2Q92630 601 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 RNF166Q96A37 237 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 URM1Q9BTM9 101 aaKnown RBP11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 WWTR1Q9GZV5 400 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 TAF9BQ9HBM6 251 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 NIT2Q9NQR4 276 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 NXT1Q9UKK6 140 aaKnown RBP11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 SHANK1Q9Y566 2161 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 SULT2B1O00204 365 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 CRHP06850 196 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 RRADP55042 308 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 RAB5BP61020 215 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 CTAG1AP78358 180 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 PDZD11Q5EBL8 140 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 PABPC1L2AQ5JQF8 200 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 DRAM2Q6UX65 266 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 H1FNTQ75WM6 255 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 CATSPERDQ86XM0 798 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 GKN2Q86XP6 184 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 SECTM1Q8WVN6 248 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 RRNAD1Q96FB5 475 aaKnown RBP11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 ZNF160Q9HCG1 818 aa11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.84□□□□□ -0.51
TNFRSF21-201ENST00000296861 ARG1P05089 322 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 IGHV4-34P06331 123 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 ACY1Q03154 408 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 EMC4Q5J8M3 183 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 C9orf135Q5VTT2 229 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR2A2Q6IF42 318 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 CLEC18BQ6UXF7 455 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 LRRC75AQ8NAA5 344 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 TERB2Q8NHR7 220 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 MRPL38Q96DV4 380 aaKnown RBP11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZNF407Q9C0G0 2248 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 H3BMH7 237 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 K7EPK0 472 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 IFNA21P01568 189 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 CAMLGP49069 296 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 MEOX2P50222 304 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 CAV2P51636 162 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 KIAA0895LQ68EN5 471 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 MOB3CQ70IA8 216 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 C6orf201Q7Z4U5 140 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 FAM71E2Q8N5Q1 922 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 EXD3Q8N9H8 876 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZSCAN4Q8NAM6 433 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 VN1R1Q9GZP7 353 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms