RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 OR5H8P0DN80 308 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 RAB11BQ15907 218 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 NKAIN1Q4KMZ8 207 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 RPUSD3Q6P087 351 aaKnown RBP14□□□□□ -0.17
CTDSP1-201ENST00000273062 ZNF584Q8IVC4 421 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC16A11Q8NCK7 471 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 UBE2E3Q969T4 207 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 CYYR1Q96J86 154 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 AIF1LQ9BQI0 150 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 IER3IP1Q9Y5U9 82 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 DHRS7CA6NNS2 312 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 H0Y8X5 98 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 RRP8O43159 456 aaKnown RBP14□□□□□ -0.17
CTDSP1-201ENST00000273062 TMEM127O75204 238 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 CNOT4O95628 575 aaKnown RBP14□□□□□ -0.17
CTDSP1-201ENST00000273062 IRF2P14316 349 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 SERPINA2P20848 420 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 LMO1P25800 156 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 CSNK1G2P78368 415 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 REEP5Q00765 189 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 PAX5Q02548 391 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 SGCGQ13326 291 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 GGTLC2Q14390 218 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 OTPQ5XKR4 325 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 MTSS1LQ765P7 747 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 RNF128Q8TEB7 428 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 ERGIC1Q969X5 290 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC35A4Q96G79 324 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC41A2Q96JW4 573 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 TSSK2Q96PF2 358 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 PRRT1Q99946 306 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 SH3BGRL3Q9H299 93 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 AHSPQ9NZD4 102 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 CLEC1BQ9P126 229 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 ALPK2Q86TB3 2170 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 HEATR5AQ86XA9 2040 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 TRBV5-7A0A0A0MS05 114 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 TGOLN2O43493 480 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ARRB1P49407 418 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 DIO1P49895 249 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 UBE2KP61086 200 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 PMPCAQ10713 525 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ANKRD55Q3KP44 614 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 FBXW9Q5XUX1 488 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ZNF776Q68DI1 518 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 PEG10Q86TG7 708 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ZNF679Q8IYX0 411 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 RNASEH2CQ8TDP1 164 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 NKD1Q969G9 470 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ELSPBP1Q96BH3 223 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ELOA3DA6NLF2 546 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 SIAH2O43255 324 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 SYT7O43581 403 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 SNRNP200O75643 2136 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 EML2O95834 649 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 GIMD1P0DJR0 217 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 GPR3P46089 330 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 CAMLGP49069 296 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 TMEM33P57088 247 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 CCL20P78556 96 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 TFF2Q03403 129 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ARHGAP19Q14CB8 494 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ELOA3BQ3SY89 546 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ZNF793Q6ZN11 406 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 METTL27Q8N6F8 245 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 ELOA3Q8NG57 546 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 OR2A1Q8NGT9 310 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 OR9A4Q8NGU2 314 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 C22orf15Q8WYQ4 148 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 CDS1Q92903 461 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 PELI2Q9HAT8 420 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 PLEKHA2Q9HB19 425 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 FGF22Q9HCT0 170 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 PHPT1Q9NRX4 125 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 CGGBP1Q9UFW8 167 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 FOXD3Q9UJU5 478 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 BRWD1Q9NSI6 2320 aa13.99□□□□□ -0.17
CTDSP1-201ENST00000273062 TICRRQ7Z2Z1 1910 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 NDUFS4O43181 175 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 TFPI2P48307 235 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 ERVFC1-1P60608 527 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 RPS21P63220 83 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 CYCSP99999 105 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 MLC1Q15049 377 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 DEGS2Q6QHC5 323 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 TMEM183AQ8IXX5 376 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 OR52E1Q8NGJ3 308 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 DOK4Q8TEW6 326 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 TMEM230Q96A57 120 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 FAM210BQ96KR6 192 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 MRGPRX4Q96LA9 322 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 CDC6Q99741 560 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 PARD6GQ9BYG4 376 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 SUSD2Q9UGT4 822 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 HSF4Q9ULV5 492 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 A0A1W2PQF6 199 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 DOK2O60496 412 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 DANCRP0C864 163 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 CEACAM8P31997 349 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 FJX1Q86VR8 437 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms