RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 OR4N2Q8NGD1 307 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 PPP1R35Q8TAP8 253 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 CPT1CQ8TCG5 803 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 RTN4IP1Q8WWV3 396 aaPredicted RBP17.47■□□□□ 0.39
SUDS3-204ENST00000543473 DVL1P1P54792 670 aaPredicted RBP17.47■□□□□ 0.39
SUDS3-204ENST00000543473 SMAD4Q13485 552 aaKnown RBP17.47■□□□□ 0.39
SUDS3-204ENST00000543473 C9orf135Q5VTT2 229 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 TMEM268Q5VZI3 342 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 FAM24BQ8N5W8 94 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 SEMA6DQ8NFY4 1073 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 OR51A2Q8NGJ7 313 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 LIPHQ8WWY8 451 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 UHRF2Q96PU4 802 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 GHITMQ9H3K2 345 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 MED29Q9NX70 200 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 YBX2Q9Y2T7 364 aaKnown RBP17.47■□□□□ 0.39
SUDS3-204ENST00000543473 LSM2Q9Y333 95 aaKnown RBP17.47■□□□□ 0.39
SUDS3-204ENST00000543473 DOCK3Q8IZD9 2030 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 A0A1B0GTH9 108 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 OR8G2PQ6IF36 304 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 OR51H1Q8NH63 302 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 VSTM5A8MXK1 200 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 CER1O95813 267 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 SLC25A1P53007 311 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 KLF9Q13886 244 aaPredicted RBP17.47■□□□□ 0.39
SUDS3-204ENST00000543473 GPR173Q9NS66 373 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 MMP24Q9Y5R2 645 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 TRIP12Q14669 1992 aaPredicted RBP17.46■□□□□ 0.39
SUDS3-204ENST00000543473 ARGFXA6NJG6 315 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 HSD17B6O14756 317 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 PDGFBP01127 241 aaPredicted RBP17.46■□□□□ 0.39
SUDS3-204ENST00000543473 SEMG1P04279 462 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 POU3F2P20265 443 aaPredicted RBP17.46■□□□□ 0.39
SUDS3-204ENST00000543473 APOBEC1P41238 236 aaKnown RBP17.46■□□□□ 0.39
SUDS3-204ENST00000543473 PIGPP57054 158 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 PPP2CBP62714 309 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 PPP2CAP67775 309 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 TOMM34Q15785 309 aaPredicted RBP17.46■□□□□ 0.39
SUDS3-204ENST00000543473 PPP1R3BQ86XI6 285 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 TXN2Q99757 166 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 TMEM272A0A1B0GTI8 110 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 IGF2P01344 180 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 TSLPQ969D9 159 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 PRRX2Q99811 253 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 CRLF2Q9HC73 371 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 UQCC1Q9NVA1 299 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 PTRH2Q9Y3E5 179 aaKnown RBP17.46■□□□□ 0.39
SUDS3-204ENST00000543473 C9orf170A2RU37 121 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 F10P00742 488 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 SRFP11831 508 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 EEF1A2Q05639 463 aaKnown RBP17.46■□□□□ 0.39
SUDS3-204ENST00000543473 DEFB123Q8N688 67 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 OR10D4PQ8NGN7 298 aa17.46■□□□□ 0.39
SUDS3-204ENST00000543473 HLA-DOBP13765 273 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 RAB4AP20338 218 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 METAP1P53582 386 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 PLXDC2Q6UX71 529 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 ARHGEF39Q8N4T4 335 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 NECAP1Q8NC96 275 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 GPX8Q8TED1 209 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 HGDQ93099 445 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 KCNJ15Q99712 375 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 FOXQ1Q9C009 403 aa17.46■□□□□ 0.38
SUDS3-204ENST00000543473 CXorf51AA0A1B0GTR3 108 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 SSSCA1O60232 199 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 ST6GAL1P15907 406 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 RBP2P50120 134 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 TMEM65Q6PI78 240 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF439Q8NDP4 499 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 NPAS1Q99742 590 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 MRPL22Q9NWU5 206 aaKnown RBP17.45■□□□□ 0.38
SUDS3-204ENST00000543473 ARFGEF1Q9Y6D6 1849 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 OGG1O15527 345 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 ACTL6BO94805 426 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 CCL4L1Q8NHW4 92 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 TLCD2A6NGC4 264 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 C2CD4DB7Z1M9 353 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF749O43361 778 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 EIF1BO60739 113 aaKnown RBP17.45■□□□□ 0.38
SUDS3-204ENST00000543473 ICOSLGO75144 302 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 TUSC2O75896 110 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF610Q8N9Z0 462 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 TVP23CQ96ET8 276 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 HAO2Q9NYQ3 351 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 LRP12Q9Y561 859 aa17.45■□□□□ 0.38
SUDS3-204ENST00000543473 KIR2DS1A0A191URI9 304 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 RAB27BO00194 218 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 MRPL33O75394 65 aaKnown RBP17.44■□□□□ 0.38
SUDS3-204ENST00000543473 NTN1O95631 604 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 EIF1P41567 113 aaKnown RBP17.44■□□□□ 0.38
SUDS3-204ENST00000543473 KIR2DS4P43632 304 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 CSRP3P50461 194 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 KIR2DS1Q14954 304 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 PTP4A1Q93096 173 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 FGF21Q9NSA1 209 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 MRPS18AQ9NVS2 196 aaKnown RBP17.44■□□□□ 0.38
SUDS3-204ENST00000543473 NKAIN2Q5VXU1 208 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 MRM1Q6IN84 353 aaKnown RBP17.44■□□□□ 0.38
SUDS3-204ENST00000543473 GPA33Q99795 319 aa17.44■□□□□ 0.38
SUDS3-204ENST00000543473 MCTS1Q9ULC4 181 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms