RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 hCG_38984A0A1B0GV85 526 aa18■□□□□ 0.47
PKP3-211ENST00000534401 F5H5P2 479 aa18■□□□□ 0.47
PKP3-211ENST00000534401 GMDSO60547 372 aa18■□□□□ 0.47
PKP3-211ENST00000534401 ZNF254O75437 659 aa18■□□□□ 0.47
PKP3-211ENST00000534401 SRP9P49458 86 aaKnown RBP18■□□□□ 0.47
PKP3-211ENST00000534401 PSMA6P60900 246 aaKnown RBP18■□□□□ 0.47
PKP3-211ENST00000534401 MVKQ03426 396 aa18■□□□□ 0.47
PKP3-211ENST00000534401 AVPI1Q5T686 147 aa18■□□□□ 0.47
PKP3-211ENST00000534401 KCTD18Q6PI47 426 aaPredicted RBP18■□□□□ 0.47
PKP3-211ENST00000534401 LRRN1Q6UXK5 716 aa18■□□□□ 0.47
PKP3-211ENST00000534401 KLBQ86Z14 1044 aa18■□□□□ 0.47
PKP3-211ENST00000534401 ZNF679Q8IYX0 411 aa18■□□□□ 0.47
PKP3-211ENST00000534401 SPRYD4Q8WW59 207 aaPredicted RBP18■□□□□ 0.47
PKP3-211ENST00000534401 ITFG2Q969R8 447 aa18■□□□□ 0.47
PKP3-211ENST00000534401 TIMD4Q96H15 378 aa18■□□□□ 0.47
PKP3-211ENST00000534401 OR8B4Q96RC9 309 aa18■□□□□ 0.47
PKP3-211ENST00000534401 CNN2Q99439 309 aaKnown RBP18■□□□□ 0.47
PKP3-211ENST00000534401 C9orf16Q9BUW7 83 aa18■□□□□ 0.47
PKP3-211ENST00000534401 TREM2Q9NZC2 230 aa18■□□□□ 0.47
PKP3-211ENST00000534401 NOP16Q9Y3C1 178 aaKnown RBP18■□□□□ 0.47
PKP3-211ENST00000534401 LRP12Q9Y561 859 aa18■□□□□ 0.47
PKP3-211ENST00000534401 MXRA5Q9NR99 2828 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 B4DSR2 109 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 FAM157AC9JC47 383 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 TMEM178BH3BS89 294 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 TGFAP01135 160 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 IGHV2-5P01817 119 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 HLA-DPB1P04440 258 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 ANXA2P07355 339 aaKnown RBP17.99■□□□□ 0.47
PKP3-211ENST00000534401 SBK2P0C263 348 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 CFL1P23528 166 aaKnown RBP17.99■□□□□ 0.47
PKP3-211ENST00000534401 HTR1FP30939 366 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 PMELP40967 661 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 MMP16P51512 607 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 DVL1P1P54792 670 aaPredicted RBP17.99■□□□□ 0.47
PKP3-211ENST00000534401 OR8B8Q15620 311 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 FAM57BQ71RH2 274 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 LRRC28Q86X40 367 aaPredicted RBP17.99■□□□□ 0.47
PKP3-211ENST00000534401 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.99■□□□□ 0.47
PKP3-211ENST00000534401 PLPP7Q8NBV4 271 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 OR56B2PQ8NGI1 322 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 Q8TCH9 128 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 ERGIC1Q969X5 290 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 EME1Q96AY2 570 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 OR10A2Q9H208 303 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 CLN6Q9NWW5 311 aa17.99■□□□□ 0.47
PKP3-211ENST00000534401 GGT3PA6NGU5 568 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 SRSF10O75494 262 aaKnown RBP17.98■□□□□ 0.47
PKP3-211ENST00000534401 MRPL3P09001 348 aaKnown RBP17.98■□□□□ 0.47
PKP3-211ENST00000534401 CDC42P60953 191 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 SNRPGP62308 76 aaKnown RBP17.98■□□□□ 0.47
PKP3-211ENST00000534401 HNRNPA0Q13151 305 aaKnown RBP17.98■□□□□ 0.47
PKP3-211ENST00000534401 TMEM155Q4W5P6 130 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 KRT77Q7Z794 578 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 UBE2FQ969M7 185 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 REEP6Q96HR9 211 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 MBOAT4Q96T53 435 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 ZNF665Q9H7R5 613 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 FAM206AQ9NX38 181 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 DNAJC27Q9NZQ0 273 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 ZNF391Q9UJN7 358 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 KCNS2Q9ULS6 477 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 ORC6Q9Y5N6 252 aa17.98■□□□□ 0.47
PKP3-211ENST00000534401 A0A0U1RQV5 110 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 IGLV3-1P01715 115 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 CA6P23280 308 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 GSK3AP49840 483 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 PEG10Q86TG7 708 aaKnown RBP17.97■□□□□ 0.47
PKP3-211ENST00000534401 SLC35F2Q8IXU6 374 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 RFLNBQ8N5W9 214 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 SPERTQ8NA61 448 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 PGAM5Q96HS1 289 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 NARFLQ9H6Q4 476 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 CDC42EP3Q9UKI2 254 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 ARHGAP32A7KAX9 2087 aa17.97■□□□□ 0.47
PKP3-211ENST00000534401 DOCK11Q5JSL3 2073 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 PHYHO14832 338 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 TBX1O43435 398 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 GABRB1P18505 474 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 RBMXP38159 391 aaKnown RBP17.96■□□□□ 0.47
PKP3-211ENST00000534401 POU4F2Q12837 409 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 ZMYND11Q15326 602 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 OR8G1Q15617 311 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 OCLNQ16625 522 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 TIGD6Q17RP2 521 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 ZNF684Q5T5D7 378 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 ZNF322Q6U7Q0 402 aaPredicted RBP17.96■□□□□ 0.47
PKP3-211ENST00000534401 ZBTB49Q6ZSB9 765 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 OR8B12Q8NGG6 310 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 RAB39BQ96DA2 213 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 LYZL4Q96KX0 146 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 MROQ9BYG7 248 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 N6AMT1Q9Y5N5 214 aa17.96■□□□□ 0.47
PKP3-211ENST00000534401 DLGAP1O14490 977 aa17.95■□□□□ 0.46
PKP3-211ENST00000534401 MSMBP08118 114 aa17.95■□□□□ 0.46
PKP3-211ENST00000534401 CPT2P23786 658 aa17.95■□□□□ 0.46
PKP3-211ENST00000534401 CXCR4P61073 352 aa17.95■□□□□ 0.46
PKP3-211ENST00000534401 BTG1P62324 171 aa17.95■□□□□ 0.46
PKP3-211ENST00000534401 EGR3Q06889 387 aa17.95■□□□□ 0.46
PKP3-211ENST00000534401 ZIK1Q3SY52 487 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms