RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 GPR50Q13585 617 aa16.67■□□□□ 0.26
USP39-218ENST00000493829 TMEM244Q5VVB8 128 aa16.67■□□□□ 0.26
USP39-218ENST00000493829 AKAP1Q92667 903 aaKnown RBP eCLIP16.67■□□□□ 0.26
USP39-218ENST00000493829 RPL3LQ92901 407 aaKnown RBP16.67■□□□□ 0.26
USP39-218ENST00000493829 CHCHD6Q9BRQ6 235 aa16.67■□□□□ 0.26
USP39-218ENST00000493829 BCL2L14Q9BZR8 327 aa16.67■□□□□ 0.26
USP39-218ENST00000493829 HHLA2Q9UM44 414 aa16.67■□□□□ 0.26
USP39-218ENST00000493829 RNF115Q9Y4L5 304 aa16.67■□□□□ 0.26
USP39-218ENST00000493829 A0A1W2PPK0 400 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 RGS9O75916 674 aaPredicted RBP16.66■□□□□ 0.26
USP39-218ENST00000493829 ISG15P05161 165 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 OCM2P0CE71 109 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 YIF1BQ5BJH7 314 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 UNQ6126/PRO20091Q6UXV3 157 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 PGAP1Q75T13 922 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 DOK3Q7L591 496 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 CLVS1Q8IUQ0 354 aaPredicted RBP16.66■□□□□ 0.26
USP39-218ENST00000493829 BHLHE23Q8NDY6 225 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 GPR148Q8TDV2 347 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 ORAI1Q96D31 301 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 TRMT61AQ96FX7 289 aaKnown RBP16.66■□□□□ 0.26
USP39-218ENST00000493829 DHDHQ9UQ10 334 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 LRRK2Q5S007 2527 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 HEATR1Q9H583 2144 aaKnown RBP16.66■□□□□ 0.26
USP39-218ENST00000493829 COL12A1Q99715 3063 aa16.66■□□□□ 0.26
USP39-218ENST00000493829 hCG_38984A0A1B0GV85 526 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 SHISA9B4DS77 424 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 IGLV3-1P01715 115 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 THBS4P35443 961 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 FABP6P51161 128 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 LSM3P62310 102 aaKnown RBP16.65■□□□□ 0.26
USP39-218ENST00000493829 NKX6-1P78426 367 aaPredicted RBP16.65■□□□□ 0.26
USP39-218ENST00000493829 FAM3AP98173 230 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 MSMPQ1L6U9 139 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 FAM27D1Q5T7N8 215 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 RGS7BPQ6MZT1 257 aaPredicted RBP16.65■□□□□ 0.26
USP39-218ENST00000493829 CMBLQ96DG6 245 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 RGCCQ9H4X1 137 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 PLEKHA1Q9HB21 404 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 STUB1Q9UNE7 303 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 GGT3PA6NGU5 568 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 J3QW42 95 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 GABRPO00591 440 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 CD1AP06126 327 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 ACKR3P25106 362 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 PSMA1P25786 263 aaKnown RBP16.65■□□□□ 0.26
USP39-218ENST00000493829 LOXP28300 417 aaPredicted RBP16.65■□□□□ 0.26
USP39-218ENST00000493829 GSK3AP49840 483 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 ACSM3Q53FZ2 586 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 OR2T2Q6IF00 324 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 OR5AS1Q8N127 324 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 OR56B2PQ8NGI1 322 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 KLF14Q8TD94 323 aaPredicted RBP16.65■□□□□ 0.26
USP39-218ENST00000493829 SPSB4Q96A44 273 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 MARS2Q96GW9 593 aaKnown RBP16.65■□□□□ 0.26
USP39-218ENST00000493829 CA10Q9NS85 328 aa16.65■□□□□ 0.26
USP39-218ENST00000493829 CADP27708 2225 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 GPX5O75715 221 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 DHRS3O75911 302 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 FAHP16930 419 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 CCL1P22362 96 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 TMEM255AQ5JRV8 349 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 TMEM91Q6ZNR0 172 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 CEACAM19Q7Z692 300 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 MS4A15Q8N5U1 240 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 SYT3Q9BQG1 590 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 RNF167Q9H6Y7 350 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 PIGLQ9Y2B2 252 aa16.64■□□□□ 0.25
USP39-218ENST00000493829 TRBV5-5A0A0J9YX44 114 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 DPPA5A6NC42 116 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 CCDC160A6NGH7 325 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 ANKRD61A6NGH8 418 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 ZNF879B4DU55 563 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 H3BSA7 217 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 AIREO43918 545 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 HLA-DPB1P04440 258 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 ZNF20P17024 532 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 CD53P19397 219 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 GCH1P30793 250 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 TGFBR1P36897 503 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 CRYBB2P43320 205 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 TNK1Q13470 666 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 ALKBH6Q3KRA9 238 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 Q499Y3 187 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 C22orf42Q6IC83 251 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 LRP11Q86VZ4 500 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 NUP37Q8NFH4 326 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 OR14K1Q8NGZ2 314 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 TMEM171Q8WVE6 324 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 TMEM106AQ96A25 262 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 FGGYQ96C11 551 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 REPIN1Q9BWE0 567 aaKnown RBP16.63■□□□□ 0.25
USP39-218ENST00000493829 DUSP13Q9UII6 198 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 ZNF391Q9UJN7 358 aa16.63■□□□□ 0.25
USP39-218ENST00000493829 LILRA1O75019 489 aa16.62■□□□□ 0.25
USP39-218ENST00000493829 MTRF1O75570 445 aaKnown RBP16.62■□□□□ 0.25
USP39-218ENST00000493829 SERPINA3P01011 423 aa16.62■□□□□ 0.25
USP39-218ENST00000493829 CFL1P23528 166 aaKnown RBP16.62■□□□□ 0.25
USP39-218ENST00000493829 COL8A1P27658 744 aa16.62■□□□□ 0.25
USP39-218ENST00000493829 GLRXP35754 106 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms