RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 C3orf80F5H4A9 247 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 LGALS8O00214 317 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 ZNF593O00488 134 aaPredicted RBP17.51■□□□□ 0.39
VSX1-206ENST00000444511 SOX14O95416 240 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 PTBP3O95758 552 aaKnown RBP17.51■□□□□ 0.39
VSX1-206ENST00000444511 SLC2A1P11166 492 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 SPI1P17947 270 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 ANOS1P23352 680 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 HOXA4Q00056 320 aaPredicted RBP17.51■□□□□ 0.39
VSX1-206ENST00000444511 GPR157Q5UAW9 335 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 CD276Q5ZPR3 534 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 OR2T33Q8NG76 320 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 OR6K6Q8NGW6 343 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 MAGIXQ9H6Y5 334 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 TRIM36Q9NQ86 728 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 C1orf123Q9NWV4 160 aa17.51■□□□□ 0.39
VSX1-206ENST00000444511 MDFIC2A0A1B0GVS7 189 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 A6NLC8 198 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 C22orf46C9J442 243 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 ZNF878C9JN71 531 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 TMPRSS2O15393 492 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 XRCC2O43543 280 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 IFNGP01579 166 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 GRPP07492 148 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 SLC25A1P53007 311 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 IL13RA1P78552 427 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 MZT1Q08AG7 82 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 PCK2Q16822 640 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 TEX30Q5JUR7 227 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 BRD3OSQ6XYD6 125 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 SPATC1Q76KD6 591 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 OR56B2PQ8NGI1 322 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 OR4Q3Q8NH05 313 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 ZDHHC16Q969W1 377 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 NMNAT2Q9BZQ4 307 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 REEP1Q9H902 201 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 UNKLQ9H9P5 680 aaKnown RBP17.5■□□□□ 0.39
VSX1-206ENST00000444511 ARMC1Q9NVT9 282 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 C14orf119Q9NWQ9 140 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 KIF17Q9P2E2 1029 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 CTSZQ9UBR2 303 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 SAMHD1Q9Y3Z3 626 aaKnown RBP17.5■□□□□ 0.39
VSX1-206ENST00000444511 U3KQV3 271 aa17.5■□□□□ 0.39
VSX1-206ENST00000444511 TRAV38-1A0A0B4J264 116 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 TCRBV5S2A0A599 114 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 RIIAD1A6NNX1 92 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 B2RBV5 119 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 TBX1O43435 398 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 ADAM20O43506 726 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 NDUFA2O43678 99 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 CLUP10909 449 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 SLC15A1P46059 708 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 BLVRAP53004 296 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 MICAQ29983 383 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 OR2T5Q6IEZ7 315 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 DHFR2Q86XF0 187 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 OR2T29Q8NH02 315 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 PCGF1Q9BSM1 259 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 DGCR6LQ9BY27 220 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 MUC13Q9H3R2 512 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 VNN3Q9NY84 501 aa17.49■□□□□ 0.39
VSX1-206ENST00000444511 hCG_1807616A0A1W2PRN6 198 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 DHRS12A0PJE2 317 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 OOEPA6NGQ2 149 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 HOXA3O43365 443 aaPredicted RBP17.48■□□□□ 0.39
VSX1-206ENST00000444511 ZNF3P17036 446 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 DDOSTP39656 456 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 BPIFB3P59826 476 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 GRB2P62993 217 aaKnown RBP17.48■□□□□ 0.39
VSX1-206ENST00000444511 EIF2B1Q14232 305 aaKnown RBP17.48■□□□□ 0.39
VSX1-206ENST00000444511 DEFB112Q30KQ8 113 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 FAM98BQ52LJ0 330 aaKnown RBP17.48■□□□□ 0.39
VSX1-206ENST00000444511 LCN8Q6JVE9 175 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 C16orf87Q6PH81 154 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 ZNF826PQ6ZT77 177 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 ARHGAP24Q8N264 748 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 OR8S1Q8NH09 359 aa17.48■□□□□ 0.39
VSX1-206ENST00000444511 ANKRD30BLA7E2S9 258 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 POM121CA8CG34 1229 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 LIPFP07098 398 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 ANXA2P07355 339 aaKnown RBP17.47■□□□□ 0.39
VSX1-206ENST00000444511 HSD11B1P28845 292 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 CFHR2P36980 270 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 CX3CR1P49238 355 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 TIGD6Q17RP2 521 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 PRR31Q5SQ13 230 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 SPSB4Q96A44 273 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 TOR3AQ9H497 397 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 SP140LQ9H930 580 aa17.47■□□□□ 0.39
VSX1-206ENST00000444511 ZNF879B4DU55 563 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 P2RY10O00398 339 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 TOX4O94842 621 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 GYPAP02724 150 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 SFTPBP07988 381 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 TRIM25Q14258 630 aaKnown RBP17.46■□□□□ 0.39
VSX1-206ENST00000444511 SLC16A9Q7RTY1 509 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 GCSAMQ8N6F7 178 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 PNLDC1Q8NA58 520 aaKnown RBP17.46■□□□□ 0.39
VSX1-206ENST00000444511 OR10G2Q8NGC3 310 aa17.46■□□□□ 0.39
VSX1-206ENST00000444511 OR6N2Q8NGY6 317 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms