RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CTXN1P60606 82 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 RAC3P60763 192 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 RPS11P62280 158 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL5A1-202ENST00000371820 CSNK2A1P68400 391 aaPredicted RBP9.13□□□□□ -0.95
COL5A1-202ENST00000371820 FAM27E3Q08E93 113 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 BAMBIQ13145 260 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 CAMK2DQ13557 499 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 FHL1Q13642 323 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 MFSD13AQ14CX5 517 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 TMEM176BQ3YBM2 270 aaPredicted RBP9.13□□□□□ -0.95
COL5A1-202ENST00000371820 ALG10Q5BKT4 473 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF684Q5T5D7 378 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 LEG1Q6P5S2 330 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF474Q6S9Z5 364 aaPredicted RBP9.13□□□□□ -0.95
COL5A1-202ENST00000371820 NR2C2APQ86WQ0 139 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 CMTM4Q8IZR5 234 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF610Q8N9Z0 462 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF680Q8NEM1 530 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 SDR9C7Q8NEX9 313 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 RNF128Q8TEB7 428 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 DACT3Q96B18 629 aaPredicted RBP9.13□□□□□ -0.95
COL5A1-202ENST00000371820 C3orf49Q96BT1 292 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 MBD6Q96DN6 1003 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 DERL3Q96Q80 235 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 NPAS1Q99742 590 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 BEX2Q9BXY8 128 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 OR10A4Q9H209 315 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 WDR76Q9H967 626 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 HRASLSQ9HDD0 168 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 NOX4Q9NPH5 578 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 DLL4Q9NR61 685 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 LAMP5Q9UJQ1 280 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 AK6Q9Y3D8 172 aaKnown RBP9.13□□□□□ -0.95
COL5A1-202ENST00000371820 BOLA1Q9Y3E2 137 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 MED12LQ86YW9 2145 aa9.13□□□□□ -0.95
COL5A1-202ENST00000371820 TRAV6A0A075B6T7 132 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 TRBV5-5A0A0J9YX44 114 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 ZC3H12DA2A288 527 aaKnown RBP9.12□□□□□ -0.95
COL5A1-202ENST00000371820 ANXA2P2A6NMY6 339 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 MCIDASD6RGH6 385 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 XRCC3O43542 346 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 OR2T1O43869 369 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 OPN1LWP04000 364 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 HRGP04196 525 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 ANXA2P07355 339 aaKnown RBP9.12□□□□□ -0.95
COL5A1-202ENST00000371820 CD3GP09693 182 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 SNRPBP14678 240 aaKnown RBP9.12□□□□□ -0.95
COL5A1-202ENST00000371820 AGTR1P30556 359 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 BTCP35070 178 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 MAP2K6P52564 334 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 OR10A3P58181 314 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 INSL4Q14641 139 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 MPPED2Q15777 294 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 TOMM34Q15785 309 aaPredicted RBP9.12□□□□□ -0.95
COL5A1-202ENST00000371820 FAM189A2Q15884 450 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF74Q16587 644 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 Q5BKY6 102 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 TMEM69Q5SWH9 247 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 LAMTOR1Q6IAA8 161 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 B3GLCTQ6Y288 498 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 DNM1P46Q6ZS02 220 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 FCRLAQ7L513 359 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 GRINAQ7Z429 371 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 KRT77Q7Z794 578 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 ATG4DQ86TL0 474 aaPredicted RBP9.12□□□□□ -0.95
COL5A1-202ENST00000371820 CDH26Q8IXH8 852 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 C10orf53Q8N6V4 93 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 OR5H6Q8NGV6 325 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 OR6K6Q8NGW6 343 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 CCDC107Q8WV48 283 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 FOXRED1Q96CU9 486 aaPredicted RBP9.12□□□□□ -0.95
COL5A1-202ENST00000371820 OR5B2Q96R09 309 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 USB1Q9BQ65 265 aaKnown RBP9.12□□□□□ -0.95
COL5A1-202ENST00000371820 ADAM19Q9H013 955 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 ALX4Q9H161 411 aaPredicted RBP9.12□□□□□ -0.95
COL5A1-202ENST00000371820 C20orf85Q9H1P6 137 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 PPIL3Q9H2H8 161 aaKnown RBP9.12□□□□□ -0.95
COL5A1-202ENST00000371820 NOX3Q9HBY0 568 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 MED9Q9NWA0 146 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 KLHL13Q9P2N7 655 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 STEAP1Q9UHE8 339 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 CYB5R1Q9UHQ9 305 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 KIF25Q9UIL4 384 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 NUP50Q9UKX7 468 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 CLEC4AQ9UMR7 237 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 FOXJ3Q9UPW0 622 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 AUP1Q9Y679 476 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 SESN1Q9Y6P5 492 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 PCNX3Q9H6A9 2034 aa9.12□□□□□ -0.95
COL5A1-202ENST00000371820 NIPBLQ6KC79 2804 aaeCLIP9.11□□□□□ -0.95
COL5A1-202ENST00000371820 CENPVL1A0A0U1RR11 272 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 HMSDA8MTL9 139 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 XKRYO14609 159 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 DNPH1O43598 174 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 LANCL1O43813 399 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 SCGNO76038 276 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 TFP02787 698 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 CD2P06729 351 aa9.11□□□□□ -0.95
COL5A1-202ENST00000371820 MELTFP08582 738 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms