RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ZNF774Q6NX45 483 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 OR14C36Q8NHC7 312 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 NEK7Q8TDX7 302 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 C6orf106Q9H6K1 298 aaPredicted RBP14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 FBXL17Q9UF56 701 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 ZNF443Q9Y2A4 671 aaPredicted RBP14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 IGKV1-8A0A0C4DH67 115 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 RPLP1P05386 114 aaKnown RBP14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 TMEM11P17152 192 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 RPL29P47914 159 aaKnown RBP14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 EIF5AP63241 154 aaKnown RBP14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 ENPP2Q13822 863 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 ADGRG7Q96K78 797 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 PTCHD1Q96NR3 888 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 NMNAT3Q96T66 252 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 SYT3Q9BQG1 590 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 ACTR3CQ9C0K3 210 aaPredicted RBP14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 MYO15AQ9UKN7 3530 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 A0A1W2PQU0 124 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 H3BQ15 152 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 TP53I11O14683 189 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 CDC40O60508 579 aaKnown RBP eCLIP14.02□□□□□ -0.165e-7■■■■□ 22.3
CTDSP1-201ENST00000273062 LYPD3O95274 346 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 CD37P11049 281 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 LAMP2P13473 410 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 PI3P19957 117 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 MC3RP41968 323 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 OR3A1P47881 315 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 CX3CR1P49238 355 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 FHL1Q13642 323 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 ITPRIPL2Q3MIP1 535 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 AADACL3Q5VUY0 350 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 RTN4RL2Q86UN3 420 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 KDM8Q8N371 416 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 CHST11Q9NPF2 352 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 FLRT3Q9NZU0 649 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 GSKIPQ9P0R6 139 aa14.02□□□□□ -0.16
CTDSP1-201ENST00000273062 TRBV5-5A0A0J9YX44 114 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 EIF1AYO14602 144 aaKnown RBP14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 LYL1P12980 280 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 PNLIPP16233 465 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 RPS27P42677 84 aaKnown RBP14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 EIF1AXP47813 144 aaKnown RBP14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 GABREP78334 506 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 HERPUD1Q15011 391 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 RABEPKQ7Z6M1 372 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 MFSD8Q8NHS3 518 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 MARCH1Q8TCQ1 289 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 GRHL3Q8TE85 626 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 MS4A8Q9BY19 250 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 CNTNAP3Q9BZ76 1288 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 AICDAQ9GZX7 198 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 CUTCQ9NTM9 273 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 RAB22AQ9UL26 194 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 RCL1Q9Y2P8 373 aaKnown RBP14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 TRIOO75962 3097 aa14.02□□□□□ -0.17
CTDSP1-201ENST00000273062 OR4C45A6NMZ5 311 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 MASP2O00187 686 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 RAB27BO00194 218 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC31A1O15431 190 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 UPK3AO75631 287 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 COL9A1P20849 921 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 CHATP28329 748 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 UCP2P55851 309 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 SSBP1Q04837 148 aaKnown RBP14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 NFATC4Q14934 902 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 TMEM196Q5HYL7 178 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 ASPHD2Q6ICH7 369 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 CLEC2AQ6UVW9 174 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 ZNF550Q7Z398 422 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 TERB2Q8NHR7 220 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 CMBLQ96DG6 245 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 CNRIP1Q96F85 164 aaPredicted RBP14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 CCNL2Q96S94 520 aaPredicted RBP14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 GPR87Q9BY21 358 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 NPIPA5A0A0B4J1W7 369 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 LOC100289279A0A1B0GTE1 492 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 WIPF3A6NGB9 483 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 CDRT15L2A8MXV6 281 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 NPIPA7E9PJI5 369 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 TBX19O60806 448 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 CST4P01036 141 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 CEACAM5P06731 702 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 METTL15P1P0C7V9 234 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 NPIPA8P0DM63 369 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 TACR3P29371 465 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 HRH1P35367 487 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 DLK1P80370 383 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 HNF4GQ14541 408 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 OR1Q1Q15612 314 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 ZNF684Q5T5D7 378 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC35G3Q8N808 338 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 SUMF2Q8NBJ7 301 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 SHDQ96IW2 340 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 STACQ99469 402 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 LPAR2Q9HBW0 351 aa14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 MRM2Q9UI43 246 aaKnown RBP14.01□□□□□ -0.17
CTDSP1-201ENST00000273062 C4orf51C9J302 202 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 ADH1BP00325 375 aa14□□□□□ -0.17
CTDSP1-201ENST00000273062 NGFRP08138 427 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 814.3 ms