RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 B9D1Q9UPM9 204 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 PRKNO60260 465 aaPredicted RBP17.5■□□□□ 0.39
SUDS3-204ENST00000543473 CTAG2O75638 210 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 IGHA1P01876 353 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 BAXQ07812 192 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 PCK2Q16822 640 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 IGSF11Q5DX21 431 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 RXFP4Q8TDU9 374 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 ZNF75AQ96N20 296 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 OR8B4Q96RC9 309 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 CABLES2Q9BTV7 478 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 S1PR5Q9H228 398 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 BCO1Q9HAY6 547 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 PRAMEF20Q5VT98 475 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 FAM109BQ6ICB4 259 aaPredicted RBP17.5■□□□□ 0.39
SUDS3-204ENST00000543473 OR2T2Q6IF00 324 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 LAIR2Q6ISS4 152 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 ARRDC1Q8N5I2 433 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 ZDHHC22Q8N966 263 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 GPR84Q9NQS5 396 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 CHRNA9Q9UGM1 479 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 A0A087WUJ7 227 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 TMEM218A2RU14 115 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 NPIPB8E9PQR5 432 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 PHOX2AO14813 284 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 TGOLN2O43493 480 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 XRCC2O43543 280 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 OPRM1P35372 400 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 BRICD5Q6PL45 260 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 SLC16A13Q7RTY0 426 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 TXNIPQ9H3M7 391 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 MED9Q9NWA0 146 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 DOCK5Q9H7D0 1870 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 RNF212BA8MTL3 300 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 MPC2O95563 127 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 CA13Q8N1Q1 262 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 NUDT9Q9BW91 350 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 MOB1AQ9H8S9 216 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 BRWD1Q9NSI6 2320 aa17.5■□□□□ 0.39
SUDS3-204ENST00000543473 ZNF727A8MUV8 499 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 C17orf112F2Z3M2 114 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 C1QCP02747 245 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 GLAP06280 429 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 ARL3P36405 182 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 GUK1Q16774 197 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 LCN15Q6UWW0 184 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 TMEM91Q6ZNR0 172 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 TRAPPC2LQ9UL33 140 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 OR5K3A6NET4 321 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 ARPC3O15145 178 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 OR5H8P0DN80 308 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 OTOSQ8NHW6 89 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 ARV1Q9H2C2 271 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 CD160O95971 181 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 CD1CP29017 333 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 CATR1Q13166 79 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 PWWP2BQ6NUJ5 590 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 ALG14Q96F25 216 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 ZNF845Q96IR2 970 aaPredicted RBP17.49■□□□□ 0.39
SUDS3-204ENST00000543473 LAT2Q9GZY6 243 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 HS3ST3A1Q9Y663 406 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 KITLGP21583 273 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 PPICP45877 212 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 ELLP55199 621 aaPredicted RBP17.49■□□□□ 0.39
SUDS3-204ENST00000543473 H3F3AP84243 136 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 ECH1Q13011 328 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 ZNF485Q8NCK3 441 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 TMPRSS5Q9H3S3 457 aa17.49■□□□□ 0.39
SUDS3-204ENST00000543473 ZMAT5Q9UDW3 170 aaKnown RBP17.49■□□□□ 0.39
SUDS3-204ENST00000543473 TMEM184BQ9Y519 407 aaPredicted RBP17.49■□□□□ 0.39
SUDS3-204ENST00000543473 BTG2P78543 158 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 TMEM196Q5HYL7 178 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 WDR38Q5JTN6 314 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 BAHD1Q8TBE0 780 aaPredicted RBP17.48■□□□□ 0.39
SUDS3-204ENST00000543473 MRGPRX1Q96LB2 322 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 ADAM19Q9H013 955 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 OTOL1A6NHN0 477 aaPredicted RBP17.48■□□□□ 0.39
SUDS3-204ENST00000543473 CST4P01036 141 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 CD27P26842 260 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 AGBL4Q5VU57 503 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 CBLN2Q8IUK8 224 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 STPG2Q8N412 459 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 PIGQQ9BRB3 760 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 WNT11O96014 354 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 SCAND1P57086 179 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 LSM11P83369 360 aaKnown RBP eCLIP17.48■□□□□ 0.39
SUDS3-204ENST00000543473 ELAVL1Q15717 326 aaKnown RBP17.48■□□□□ 0.39
SUDS3-204ENST00000543473 AAED1Q7RTV5 226 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 TNFRSF10CO14798 259 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 OLFM2O95897 454 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 ZNF85Q03923 595 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 HYAL1Q12794 435 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 MIDNQ504T8 468 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 PATE1Q8WXA2 126 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 C4orf45Q96LM5 186 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 PBOV1Q9GZY1 135 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 CHST11Q9NPF2 352 aa17.48■□□□□ 0.39
SUDS3-204ENST00000543473 ZNF98A6NK75 572 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 CD96P40200 585 aa17.47■□□□□ 0.39
SUDS3-204ENST00000543473 COMMD1Q8N668 190 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms