RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 CCRL2O00421 344 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 SIAH2O43255 324 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 GPRIN2O60269 458 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 TGFBR2P37173 567 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 CCR9P51686 369 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 TPBGQ13641 420 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 INSL4Q14641 139 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 HLXQ14774 488 aaPredicted RBP16.72■□□□□ 0.27
USP39-218ENST00000493829 VHLLQ6RSH7 139 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 SLC22A25Q6T423 547 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 GPR141Q7Z602 305 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 EGFL6Q8IUX8 553 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 OR52H1Q8NGJ2 320 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 OR51A4Q8NGJ6 313 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 OR1J1Q8NGS3 322 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 OR13F1Q8NGS4 319 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 RPS4Y2Q8TD47 263 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 PIK3IP1Q96FE7 263 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 LYZL4Q96KX0 146 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 ESRP2Q9H6T0 727 aaKnown RBP16.72■□□□□ 0.27
USP39-218ENST00000493829 GPR84Q9NQS5 396 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 NDUFB11Q9NX14 153 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 FZR1Q9UM11 496 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 RTTNQ86VV8 2226 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 TMEM212A6NML5 194 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 PLPP2O43688 288 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 ATE1O95260 518 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 CLDN1O95832 211 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 CD36P16671 472 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 MAGEB1P43366 347 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 UCP2P55851 309 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 PPP1CBP62140 327 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 BLMHQ13867 455 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 COLCA1Q6ZS62 124 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 DMRTC2Q8IXT2 367 aaPredicted RBP16.71■□□□□ 0.27
USP39-218ENST00000493829 REEP6Q96HR9 211 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 SP140LQ9H930 580 aa16.71■□□□□ 0.27
USP39-218ENST00000493829 ANKHD1Q8IWZ3 2542 aaKnown RBP16.7■□□□□ 0.26
USP39-218ENST00000493829 CLEC18AA5D8T8 446 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 UBCP0CG48 685 aaKnown RBP16.7■□□□□ 0.26
USP39-218ENST00000493829 EPXP11678 715 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 IGFBP2P18065 325 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 ZNF92Q03936 586 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 NCMAPQ5T1S8 102 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 CLEC18BQ6UXF7 455 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 CLEC18CQ8NCF0 446 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 KBTBD8Q8NFY9 601 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 TSEN15Q8WW01 171 aaKnown RBP16.7■□□□□ 0.26
USP39-218ENST00000493829 SGK3Q96BR1 496 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 HS3ST6Q96QI5 342 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 POU2F3Q9UKI9 436 aa16.7■□□□□ 0.26
USP39-218ENST00000493829 KLF2Q9Y5W3 355 aaPredicted RBP16.7■□□□□ 0.26
USP39-218ENST00000493829 A0A1B0GVI7 797 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 ACOD1A6NK06 481 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 LMX1BO60663 402 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 NR4A1P22736 598 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 GADD45AP24522 165 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 SOX2P48431 317 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 MALLQ13021 153 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 BEX5Q5H9J7 111 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 ZNF704Q6ZNC4 412 aaPredicted RBP16.69■□□□□ 0.26
USP39-218ENST00000493829 MRPL21Q7Z2W9 205 aaKnown RBP16.69■□□□□ 0.26
USP39-218ENST00000493829 SLC25A40Q8TBP6 338 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 OR2J1Q9GZK6 312 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 TBCCD1Q9NVR7 557 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 ZNF281Q9Y2X9 895 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 ATP23Q9Y6H3 246 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 DEFB108AA8MXU0 73 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 XRCC2O43543 280 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 SYT7O43581 403 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 CD3EP07766 207 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 PCSK6P29122 969 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 RAD52P43351 418 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 YIPF6Q96EC8 236 aa16.69■□□□□ 0.26
USP39-218ENST00000493829 UTP20O75691 2785 aaKnown RBP16.68■□□□□ 0.26
USP39-218ENST00000493829 A0A1B0GTI1 187 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 A6NIN4 97 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 ICMTO60725 284 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 PLAUP00749 431 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 ACHEP22303 614 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 GABRA5P31644 462 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 PEX19P40855 299 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 FABP5Q01469 135 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 GK2Q14410 553 aaPredicted RBP16.68■□□□□ 0.26
USP39-218ENST00000493829 GPR107Q5VW38 600 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 OR5L1Q8NGL2 311 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 OR13C3Q8NGS6 347 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 FAM222BQ8WU58 562 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 NEUROG1Q92886 237 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 OR14A2Q96R54 314 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 FUNDC2Q9BWH2 189 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 NAA50Q9GZZ1 169 aaKnown RBP16.68■□□□□ 0.26
USP39-218ENST00000493829 OR51E2Q9H255 320 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 EXOSC4Q9NPD3 245 aaKnown RBP16.68■□□□□ 0.26
USP39-218ENST00000493829 SF3B6Q9Y3B4 125 aaKnown RBP16.68■□□□□ 0.26
USP39-218ENST00000493829 SPEF1Q9Y4P9 236 aa16.68■□□□□ 0.26
USP39-218ENST00000493829 A0A0U1RQV5 110 aa16.67■□□□□ 0.26
USP39-218ENST00000493829 LOC100506127A0A0U1RQW1 187 aa16.67■□□□□ 0.26
USP39-218ENST00000493829 MPV17P39210 176 aa16.67■□□□□ 0.26
USP39-218ENST00000493829 RPS11P62280 158 aaKnown RBP eCLIP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms