RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 GK3PQ14409 553 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 KLF17Q5JT82 389 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 CLEC12AQ5QGZ9 265 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 LINC01590Q5TEZ4 76 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 OR2T5Q6IEZ7 315 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 SHQ1Q6PI26 577 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 LINC00346Q8IVM7 164 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 OR5AS1Q8N127 324 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 ATG16L2Q8NAA4 619 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 CYB561A3Q8NBI2 242 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 AQP11Q8NBQ7 271 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 SLC37A3Q8NCC5 494 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 OR2AJ1Q8NGZ0 328 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 OR2T29Q8NH02 315 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 OR4Q3Q8NH05 313 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 ZNF418Q8TF45 676 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 STMN2Q93045 179 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 ERGIC1Q969X5 290 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 HCAR1Q9BXC0 346 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 FN3KQ9H479 309 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 TMEM100Q9NV29 134 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 PCDHB10Q9UN67 800 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 RRP15Q9Y3B9 282 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 INSIG2Q9Y5U4 225 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 DOCK11Q5JSL3 2073 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ISPDA4D126 451 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 C5orf63A6NC05 138 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ARRDC5A6NEK1 342 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 AQP12BA6NM10 295 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 CD300LBA8K4G0 201 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 CEACAM18A8MTB9 384 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ANKRD65E5RJM6 399 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 F5H5P2 479 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 TNFRSF13BO14836 293 aaPredicted RBP8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 CCNB2O95067 398 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ANOS1P23352 680 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 CD80P33681 288 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 TPTEP56180 551 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ACTR3P61158 418 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF154Q13106 437 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 CRMP1Q14194 572 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 DRAM2Q6UX65 266 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 RHOUQ7L0Q8 258 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 AQP12AQ8IXF9 295 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 MUC20Q8N307 709 aaPredicted RBP8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ZDHHC22Q8N966 263 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 OR10AD1Q8NGE0 317 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 OR52L1Q8NGH7 329 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF420Q8TAQ5 688 aaPredicted RBP8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 ST7LQ8TDW4 575 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 SPSB4Q96A44 273 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 CDADC1Q9BWV3 514 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 TSSK6Q9BXA6 273 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 SLC22A4Q9H015 551 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 WDR76Q9H967 626 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 MARCH7Q9H992 704 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 UBAP1Q9NZ09 502 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 LRCH1Q9Y2L9 728 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 COMMD3-BMI1R4GMX3 469 aa8.14□□□□□ -1.11
TMEM39A-210ENST00000490099 M0R135 149 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 LCATP04180 440 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 HLA-DPB1P04440 258 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 SNRPBP14678 240 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF823P16415 610 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 SPI1P17947 270 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 PSMB10P40306 273 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 RPS27P42677 84 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 BLVRAP53004 296 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF92Q03936 586 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 PPP1R8Q12972 351 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 MALLQ13021 153 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 SNAI3Q3KNW1 292 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF404Q494X3 552 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 FAM98BQ52LJ0 330 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 ZFP1Q6P2D0 407 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 LYPD4Q6UWN0 246 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF841Q6ZN19 808 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 PGAP1Q75T13 922 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 PRSS45Q7RTY3 260 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 MOGAT3Q86VF5 341 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 SPATA24Q86W54 205 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 KLBQ86Z14 1044 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 ADGRG5Q8IZF4 528 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 OR2T33Q8NG76 320 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 SPTSSAQ969W0 71 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 SLCO4A1Q96BD0 722 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF799Q96GE5 643 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 JMJD8Q96S16 334 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 KCNJ15Q99712 375 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 TMEM246Q9BRR3 403 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 CHID1Q9BWS9 393 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 SUCNR1Q9BXA5 334 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 YY1AP1Q9H869 796 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 REEP1Q9H902 201 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 ESM1Q9NQ30 184 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 CMC2Q9NRP2 79 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 MIOXQ9UGB7 285 aa8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 SAMHD1Q9Y3Z3 626 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-210ENST00000490099 AUP1Q9Y679 476 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms