RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 OR10S1Q8NGN2 331 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 SLC25A28Q96A46 364 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 UPRTQ96BW1 309 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 BTBD10Q9BSF8 475 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 ARL2BPQ9Y2Y0 163 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 PCDHGB1Q9Y5G3 927 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 TRAV40A0A0B4J280 105 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 KIR2DS1A0A191URI9 304 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 GGT3PA6NGU5 568 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 CD300LBA8K4G0 201 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 DCTN3O75935 186 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 MPPED2Q15777 294 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 SNAI3Q3KNW1 292 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 LYPD2Q6UXB3 125 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 C19orf18Q8NEA5 215 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 OR51L1Q8NGJ5 315 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 OR4C15Q8NGM1 316 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 DACT3Q96B18 629 aaPredicted RBP17.56■□□□□ 0.4
VSX1-206ENST00000444511 C1orf147Q96MC9 270 aaPredicted RBP17.56■□□□□ 0.4
VSX1-206ENST00000444511 DDOQ99489 341 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 NUDT16L1Q9BRJ7 211 aaKnown RBP17.56■□□□□ 0.4
VSX1-206ENST00000444511 COPS4Q9BT78 406 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 ADAT1Q9BUB4 502 aaKnown RBP17.56■□□□□ 0.4
VSX1-206ENST00000444511 TRIM15Q9C019 465 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 FN3KRPQ9HA64 309 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 TBC1D23Q9NUY8 699 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 IL20Q9NYY1 176 aa17.56■□□□□ 0.4
VSX1-206ENST00000444511 PHYHO14832 338 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 CCNB2O95067 398 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 GASTP01350 101 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 RNASE1P07998 156 aaKnown RBP17.55■□□□□ 0.4
VSX1-206ENST00000444511 ZNF92Q03936 586 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 WDR25Q64LD2 544 aaPredicted RBP17.55■□□□□ 0.4
VSX1-206ENST00000444511 LYPD4Q6UWN0 246 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 DRAM2Q6UX65 266 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 RASSF6Q6ZTQ3 369 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 C9orf139Q6ZV77 190 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 DCXRQ7Z4W1 244 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 SLC37A3Q8NCC5 494 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 OR9Q1Q8NGQ5 310 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 OR2AE1Q8NHA4 323 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 ZNRF4Q8WWF5 429 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 ZNF747Q9BV97 191 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 ACTR3BQ9P1U1 418 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 RNF7Q9UBF6 113 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 COMMD3-BMI1R4GMX3 469 aa17.55■□□□□ 0.4
VSX1-206ENST00000444511 GMDSO60547 372 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 PLATP00750 562 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 SPARCP09486 303 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 ATP6V1B2P21281 511 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 FMO3P31513 532 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 OTX1P32242 354 aaPredicted RBP17.54■□□□□ 0.4
VSX1-206ENST00000444511 MNAT1P51948 309 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 GNGT1P63211 74 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 TAF13Q15543 124 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 KCNJ8Q15842 424 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 GLYATL3Q5SZD4 288 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 ZNF362Q5T0B9 420 aaPredicted RBP17.54■□□□□ 0.4
VSX1-206ENST00000444511 SHISA2Q6UWI4 295 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 FITM2Q8N6M3 262 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 BOLLQ8N9W6 283 aaKnown RBP17.54■□□□□ 0.4
VSX1-206ENST00000444511 AQP11Q8NBQ7 271 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 OR8D4Q8NGM9 314 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 TSSK6Q9BXA6 273 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 MMADHCQ9H3L0 296 aaPredicted RBP17.54■□□□□ 0.4
VSX1-206ENST00000444511 CENPMQ9NSP4 180 aa17.54■□□□□ 0.4
VSX1-206ENST00000444511 CLDN34H7C241 214 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 PSKH1P11801 424 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 ENTPD1P49961 510 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 PRKXP51817 358 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 CRMP1Q14194 572 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 SLC9A3R2Q15599 337 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 ZNF770Q6IQ21 691 aaPredicted RBP17.53■□□□□ 0.4
VSX1-206ENST00000444511 LNX2Q8N448 690 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 SLAMF6Q96DU3 332 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 TECTBQ96PL2 329 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 MRPL15Q9P015 296 aaKnown RBP17.53■□□□□ 0.4
VSX1-206ENST00000444511 N6AMT1Q9Y5N5 214 aa17.53■□□□□ 0.4
VSX1-206ENST00000444511 SOX21Q9Y651 276 aaPredicted RBP17.53■□□□□ 0.4
VSX1-206ENST00000444511 C5orf63A6NC05 138 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 ENSAO43768 121 aaKnown RBP17.52■□□□□ 0.4
VSX1-206ENST00000444511 GYPBP06028 91 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 PSMB10P40306 273 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 MAGEA2P43356 314 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 NPY4RP50391 375 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 GYS2P54840 703 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 FGF12P61328 243 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 PPP1R8Q12972 351 aaKnown RBP17.52■□□□□ 0.4
VSX1-206ENST00000444511 OR8B8Q15620 311 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 SFRP4Q6FHJ7 346 aaPredicted RBP17.52■□□□□ 0.4
VSX1-206ENST00000444511 ZNF841Q6ZN19 808 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 PIGWQ7Z7B1 504 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 SPERTQ8NA61 448 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 ZNF511Q8NB15 262 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 PLPP7Q8NBV4 271 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 KCNJ15Q99712 375 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 OPA3Q9H6K4 179 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 ERVK-18Q9QC07 812 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 BAIAP2Q9UQB8 552 aa17.52■□□□□ 0.4
VSX1-206ENST00000444511 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms