RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PLA2G7Q13093 441 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 TMEM255AQ5JRV8 349 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 ZNF626Q68DY1 528 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 STEAP1BQ6NZ63 245 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 ABHD12BQ7Z5M8 362 aaPredicted RBP12.38□□□□□ -0.43
USF1-202ENST00000368020 COMMD2Q86X83 199 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 DTX1Q86Y01 620 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 TMEM123Q8N131 208 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 ZNF283Q8N7M2 679 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 LILRB4Q8NHJ6 448 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 OR51E1Q8TCB6 317 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 CCDC107Q8WV48 283 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 GINS4Q9BRT9 223 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 ALX4Q9H161 411 aaPredicted RBP12.38□□□□□ -0.43
USF1-202ENST00000368020 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
USF1-202ENST00000368020 PLSCR3Q9NRY6 295 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 HSPB11Q9Y547 144 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 A0A0U1RQV5 110 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 A0A1B0GTI1 187 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 DHHO43323 396 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 RAMP1O60894 148 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 GIPP09681 153 aaPredicted RBP12.37□□□□□ -0.43
USF1-202ENST00000368020 ENPP1P22413 925 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 CASRP41180 1078 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 HIST1H3AP68431 136 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 MFAP5Q13361 173 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 MEF2DQ14814 521 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 PDSS1Q5T2R2 415 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 HIST2H3PS2Q5TEC6 136 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 SEZ6L2Q6UXD5 910 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 HIST2H3AQ71DI3 136 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 C9orf62Q8N4C0 152 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 OR8B12Q8NGG6 310 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 OR14L1PQ8NHC6 308 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 SEH1LQ96EE3 360 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 ADAT3Q96EY9 351 aaPredicted RBP12.37□□□□□ -0.43
USF1-202ENST00000368020 ZNF416Q9BWM5 594 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 CNTD2Q9H8S5 307 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 ZFP64Q9NPA5 681 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 P4HTMQ9NXG6 502 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 ABI3Q9P2A4 366 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 FOXD3Q9UJU5 478 aaPredicted RBP12.37□□□□□ -0.43
USF1-202ENST00000368020 BOKQ9UMX3 212 aaPredicted RBP12.37□□□□□ -0.43
USF1-202ENST00000368020 FLVCR1Q9Y5Y0 555 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 CDK2AP1O14519 115 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 TERTO14746 1132 aaKnown RBP12.37□□□□□ -0.43
USF1-202ENST00000368020 RER1O15258 196 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 ALX3O95076 343 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 CHRM2P08172 466 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 PTHLHP12272 177 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 TBPP20226 339 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 ZNF93P35789 620 aaPredicted RBP12.37□□□□□ -0.43
USF1-202ENST00000368020 RAP2BP61225 183 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 MRPS34P82930 218 aaKnown RBP12.37□□□□□ -0.43
USF1-202ENST00000368020 ECH1Q13011 328 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 SGCAQ16586 387 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 UTS2BQ765I0 119 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 C20orf196Q8IYI0 205 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 OR4D6Q8NGJ1 314 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 IP6K3Q96PC2 410 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 ULBP2Q9BZM5 246 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 DLL4Q9NR61 685 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 GHRLQ9UBU3 117 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 ZNF69Q9UC07 566 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 MGAT4AQ9UM21 535 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 FLVCR2Q9UPI3 526 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 WASF3Q9UPY6 502 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 BOLA1Q9Y3E2 137 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 RHBDD3Q9Y3P4 386 aa12.37□□□□□ -0.43
USF1-202ENST00000368020 A0A0J9YW62 118 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 TNFSF11O14788 317 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 MTRF1O75570 445 aaKnown RBP12.36□□□□□ -0.43
USF1-202ENST00000368020 RAB3DO95716 219 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 CXCL3P19876 107 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 DNASE1P24855 282 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 PRKXP51817 358 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 CARD18P57730 90 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 B3GALT5-AS1P59052 145 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 FAM27BQ5VT28 67 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 AWAT2Q6E213 333 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 ZNF584Q8IVC4 421 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 PNLDC1Q8NA58 520 aaKnown RBP12.36□□□□□ -0.43
USF1-202ENST00000368020 BEST4Q8NFU0 473 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 OR52N4Q8NGI2 321 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 KCNG3Q8TAE7 436 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 AQP3Q92482 292 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 NKD1Q969G9 470 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 SPTSSAQ969W0 71 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 GPR84Q9NQS5 396 aa12.36□□□□□ -0.43
USF1-202ENST00000368020 LOC101059948A0A1B0GTJ6 334 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 ZNF736B4DX44 427 aaPredicted RBP12.35□□□□□ -0.43
USF1-202ENST00000368020 WDPCPO95876 746 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 HPXP02790 462 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 CD74P04233 296 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 CNR1P21554 472 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 OTX1P32242 354 aaPredicted RBP12.35□□□□□ -0.43
USF1-202ENST00000368020 THBS4P35443 961 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 Q0VFX4 171 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 LAMTOR1Q6IAA8 161 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms