RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ZNF724A8MTY0 619 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 OR7C1O76099 320 aaPredicted RBP13.21□□□□□ -0.29
VPS36-207ENST00000611132 TMIGD3P0DMS9 266 aaPredicted RBP13.21□□□□□ -0.29
VPS36-207ENST00000611132 PLP2Q04941 152 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 DUSP2Q05923 314 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 COMMD1Q8N668 190 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 SUMF1Q8NBK3 374 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 CCL4L1Q8NHW4 92 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 SAT2Q96F10 170 aaPredicted RBP13.21□□□□□ -0.29
VPS36-207ENST00000611132 CHST6Q9GZX3 395 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 ALX4Q9H161 411 aaPredicted RBP13.21□□□□□ -0.29
VPS36-207ENST00000611132 TMPRSS5Q9H3S3 457 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 NECAP2Q9NVZ3 263 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 KLF15Q9UIH9 416 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 LRP12Q9Y561 859 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 PCDHGA1Q9Y5H4 931 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 PARP14Q460N5 1801 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 MYO16Q9Y6X6 1858 aa13.21□□□□□ -0.29
VPS36-207ENST00000611132 STMND1H3BQB6 276 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 GLI4P10075 376 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 ZNF133P52736 654 aaPredicted RBP13.21□□□□□ -0.3
VPS36-207ENST00000611132 C17orf67Q0P5P2 114 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 AGBL4Q5VU57 503 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 C1orf87Q8N0U7 546 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 TMEM217Q8N7C4 229 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 C15orf54Q8N8G6 183 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 PATE1Q8WXA2 126 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 RBMXL1Q96E39 390 aaKnown RBP13.21□□□□□ -0.3
VPS36-207ENST00000611132 EMC6Q9BV81 110 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 RAB18Q9NP72 206 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 CHRNA9Q9UGM1 479 aa13.21□□□□□ -0.3
VPS36-207ENST00000611132 SPP1P10451 314 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 GUK1Q16774 197 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 DOK3Q7L591 496 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 MRGPREQ86SM8 312 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 PIGTQ969N2 578 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 SEH1LQ96EE3 360 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 KTI12Q96EK9 354 aaPredicted RBP13.2□□□□□ -0.3
VPS36-207ENST00000611132 KCNK15Q9H427 330 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 SLC17A4Q9Y2C5 497 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 TNFRSF10CO14798 259 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 DBHP09172 617 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 DUSP1P28562 367 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 HNRNPKP61978 463 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS36-207ENST00000611132 MFAP5Q13361 173 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 ZNF345Q14585 488 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 OR5AP2Q8NGF4 316 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 COX14Q96I36 57 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 SGCZQ96LD1 299 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 ZNF426Q9BUY5 554 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 NXT1Q9UKK6 140 aaKnown RBP13.2□□□□□ -0.3
VPS36-207ENST00000611132 KIAA0100Q14667 2235 aaKnown RBP13.2□□□□□ -0.3
VPS36-207ENST00000611132 SEC16AO15027 2179 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 TRAV8-7A0A075B6U6 113 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 OR4C45A6NMZ5 311 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 ZNF587BE7ETH6 402 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 H0Y8X5 98 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 MBTPS2O43462 519 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 CXCL10P02778 98 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 CRHP06850 196 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 KCNJ3P48549 501 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 ADPRHP54922 357 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 FUT5Q11128 374 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 CPEB2Q7Z5Q1 589 aaKnown RBP13.2□□□□□ -0.3
VPS36-207ENST00000611132 CMBLQ96DG6 245 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 ANK1P16157 1881 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 SIGLEC5O15389 551 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 FGF2P09038 288 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 SIGLEC14Q08ET2 396 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 PRICKLE4Q2TBC4 344 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 FAM199XQ6PEV8 388 aaPredicted RBP13.2□□□□□ -0.3
VPS36-207ENST00000611132 PRSS54Q6PEW0 395 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 SECTM1Q8WVN6 248 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 ZNF681Q96N22 645 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 PRSS27Q9BQR3 290 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 MOB1AQ9H8S9 216 aa13.2□□□□□ -0.3
VPS36-207ENST00000611132 ST6GAL1P15907 406 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 BATFQ16520 125 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 HAGHQ16775 308 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 FIP1L1Q6UN15 594 aaKnown RBP13.19□□□□□ -0.3
VPS36-207ENST00000611132 RSC1A1Q92681 617 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 TNFSF18Q9UNG2 199 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 A0A1W2PPV9 198 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 HPNP05981 417 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 CD1AP06126 327 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 LAP3P28838 519 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 HSF1Q00613 529 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 PRTGQ2VWP7 1150 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 MIDNQ504T8 468 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 TMEM31Q5JXX7 168 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 FAHD2BQ6P2I3 314 aaPredicted RBP13.19□□□□□ -0.3
VPS36-207ENST00000611132 WDR5BQ86VZ2 330 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 ARHGEF39Q8N4T4 335 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 ZNF485Q8NCK3 441 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 OR5L1Q8NGL2 311 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 FAHD2AQ96GK7 314 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 AK3Q9UIJ7 227 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 MRPS17Q9Y2R5 130 aaKnown RBP13.19□□□□□ -0.3
VPS36-207ENST00000611132 CTSVO60911 334 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 RAB32Q13637 225 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms