RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PRDM7Q9NQW5 492 aa17.54■□□□□ 0.4
SUDS3-204ENST00000543473 R4GMQ9 66 aa17.54■□□□□ 0.4
SUDS3-204ENST00000543473 H7BYZ3 331 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 CLDN1O95832 211 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 ZFP36L2P47974 494 aaKnown RBP17.53■□□□□ 0.4
SUDS3-204ENST00000543473 HTRA4P83105 476 aaPredicted RBP17.53■□□□□ 0.4
SUDS3-204ENST00000543473 PLA1AQ53H76 456 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 DUSP23Q9BVJ7 150 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 NEU3Q9UQ49 428 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 MMACHCQ9Y4U1 282 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 POM121BA6NF01 834 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 OTX2P32243 289 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 UBE2NP61088 152 aaKnown RBP17.53■□□□□ 0.4
SUDS3-204ENST00000543473 THSD4Q6ZMP0 1018 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 SLC5A6Q9Y289 635 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 PIGLQ9Y2B2 252 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 LANCL1O43813 399 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 SCAF4O95104 1147 aaKnown RBP17.53■□□□□ 0.4
SUDS3-204ENST00000543473 RPA2P15927 270 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 PSMB3P49720 205 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 GRB2P62993 217 aaKnown RBP17.53■□□□□ 0.4
SUDS3-204ENST00000543473 C4orf17Q53FE4 359 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 CLEC9AQ6UXN8 241 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 OR4D9Q8NGE8 314 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 FBLIM1Q8WUP2 373 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 GNPNAT1Q96EK6 184 aaPredicted RBP17.53■□□□□ 0.4
SUDS3-204ENST00000543473 WDR34Q96EX3 536 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 GPR137Q96N19 417 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 CRISPLD2Q9H0B8 497 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 MMP17Q9ULZ9 603 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 GPR31O00270 319 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 AKR7A3O95154 331 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 MSR1P21757 451 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 BCKDHBP21953 392 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 PRTGQ2VWP7 1150 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 ANKRD16Q6P6B7 361 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 TMEM123Q8N131 208 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 ENKD1Q9H0I2 346 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 GNG13Q9P2W3 67 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 PPIL1Q9Y3C6 166 aa17.53■□□□□ 0.4
SUDS3-204ENST00000543473 HYAL3O43820 417 aaPredicted RBP17.52■□□□□ 0.4
SUDS3-204ENST00000543473 RABEPKQ7Z6M1 372 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 OR4D11Q8NGI4 311 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 C16orf52Q8NHV5 167 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 STT3BQ8TCJ2 826 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 KIRREL1Q96J84 757 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 OR14J1Q9UGF5 321 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 C7orf66A4D0T2 115 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 C2orf72A6NCS6 295 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 ADRA2CP18825 462 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 IL2RGP31785 369 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 TUSC1Q2TAM9 212 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 SLC25A30Q5SVS4 291 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 OR52W1Q6IF63 320 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 DPPA2Q7Z7J5 298 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 GJC3Q8NFK1 279 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 CDH20Q9HBT6 801 aa17.52■□□□□ 0.4
SUDS3-204ENST00000543473 FABP9Q0Z7S8 132 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 DMKNQ6E0U4 476 aaPredicted RBP17.52■□□□□ 0.39
SUDS3-204ENST00000543473 SLC38A9Q8NBW4 561 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 CCDC74AQ96AQ1 378 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 C6orf106Q9H6K1 298 aaPredicted RBP17.52■□□□□ 0.39
SUDS3-204ENST00000543473 SIRT3Q9NTG7 399 aaPredicted RBP17.52■□□□□ 0.39
SUDS3-204ENST00000543473 MDFIC2A0A1B0GVS7 189 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 IDSB3KWA1 339 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 CYB5BO43169 146 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 GSTZ1O43708 216 aaPredicted RBP17.52■□□□□ 0.39
SUDS3-204ENST00000543473 APLNRP35414 380 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 TRILQ7L0X0 811 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 BAGE3Q86Y29 109 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 BAGE2Q86Y30 109 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 DTWD2Q8NBA8 298 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 FAM174AQ8TBP5 190 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 OR51B6Q9H340 312 aa17.52■□□□□ 0.39
SUDS3-204ENST00000543473 A0A0B4J2E0 115 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 A0A1B0GX12 115 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 SLC35A1P78382 337 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 NR0B2Q15466 257 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 ZFP62Q8NB50 900 aaPredicted RBP17.51■□□□□ 0.39
SUDS3-204ENST00000543473 MORN4Q8NDC4 146 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 NAT6Q93015 286 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 CTDSPLO15194 276 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 GSTP1P09211 210 aaKnown RBP17.51■□□□□ 0.39
SUDS3-204ENST00000543473 HSF1Q00613 529 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 KCNAB1Q14722 419 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 LAIR1Q6GTX8 287 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 SEZ6L2Q6UXD5 910 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 OR5M9Q8NGP3 310 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 NANOS1Q8WY41 292 aaKnown RBP17.51■□□□□ 0.39
SUDS3-204ENST00000543473 ASH2LQ9UBL3 628 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 CTSFQ9UBX1 484 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 OPN4Q9UHM6 478 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 FAM96BQ9Y3D0 163 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 PRAMEF4O60810 478 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 PPP1R1AQ13522 171 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 SLC37A2Q8TED4 501 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 NKX3-1Q99801 234 aaPredicted RBP17.51■□□□□ 0.39
SUDS3-204ENST00000543473 CFHR5Q9BXR6 569 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 SLC17A5Q9NRA2 495 aa17.51■□□□□ 0.39
SUDS3-204ENST00000543473 ACAD8Q9UKU7 415 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms