RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 BSPH1Q075Z2 132 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 RPL22L1Q6P5R6 122 aaKnown RBP16.76■□□□□ 0.27
USP39-218ENST00000493829 COMMD2Q86X83 199 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
USP39-218ENST00000493829 FAM169BQ8N8A8 192 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 IL17RDQ8NFM7 739 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 OR1J2Q8NGS2 313 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 RADILQ96JH8 1075 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 KCNS3Q9BQ31 491 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 CRIM1Q9NZV1 1036 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 ZNF319Q9P2F9 582 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 ATP6V1G2-DDX39BF2Z307 99 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 NGFP01138 241 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 CD40P25942 277 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 LIPAP38571 399 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 TGM4P49221 684 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 MMP16P51512 607 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 NR1H2P55055 460 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 MRPL28Q13084 256 aaKnown RBP16.75■□□□□ 0.27
USP39-218ENST00000493829 SPATA46Q5T0L3 261 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 TMEM108Q6UXF1 575 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 PRSS45Q7RTY3 260 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 RDH10Q8IZV5 341 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 OR2AE1Q8NHA4 323 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 SMIM19Q96E16 107 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 TMED9Q9BVK6 235 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 SLC24A3Q9HC58 644 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 DPRXA6NFQ7 191 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 PRSS44E7EML9 344 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 P2RY10O00398 339 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 ABCD4O14678 606 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 APOC1P02654 83 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 JUNBP17275 347 aaPredicted RBP16.75■□□□□ 0.27
USP39-218ENST00000493829 KIR2DL3P43628 341 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 ERVS71-1P61550 626 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 BDH1Q02338 343 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 ACSM1Q08AH1 577 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 SSX1Q16384 188 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 SYT6Q5T7P8 510 aaPredicted RBP16.75■□□□□ 0.27
USP39-218ENST00000493829 ZNF544Q6NX49 715 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 ZNF676Q8N7Q3 588 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 OR13C5Q8NGS8 318 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 TMEM203Q969S6 136 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 POFUT1Q9H488 388 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 MOB1AQ9H8S9 216 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 PTTG3PQ9NZH4 202 aa16.75■□□□□ 0.27
USP39-218ENST00000493829 SMPD2O60906 423 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 ZFPL1O95159 310 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 CRYAAP02489 173 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 TTRP02766 147 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 ZNF35P13682 527 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 RPS25P62851 125 aaKnown RBP16.74■□□□□ 0.27
USP39-218ENST00000493829 CCDC58Q4VC31 144 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 GLYATL3Q5SZD4 288 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 DMKNQ6E0U4 476 aaPredicted RBP16.74■□□□□ 0.27
USP39-218ENST00000493829 FDX2Q6P4F2 183 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 OR5AK2Q8NH90 309 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 OR51E1Q8TCB6 317 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 PLPPR2Q96GM1 343 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 DCLRE1CQ96SD1 692 aaKnown RBP16.74■□□□□ 0.27
USP39-218ENST00000493829 NGBQ9NPG2 151 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 EIF3KQ9UBQ5 218 aaKnown RBP16.74■□□□□ 0.27
USP39-218ENST00000493829 NUFIP1Q9UHK0 495 aaKnown RBP16.74■□□□□ 0.27
USP39-218ENST00000493829 DOPEY1Q5JWR5 2465 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 TENM4Q6N022 2769 aa16.74■□□□□ 0.27
USP39-218ENST00000493829 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.73■□□□□ 0.27
USP39-218ENST00000493829 OR4C45A6NMZ5 311 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 CASKO14936 926 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 OGG1O15527 345 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 CPEP16870 476 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 ALDH3B2P48448 385 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 C3orf36Q3SXR2 165 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 C1QTNF12Q5T7M4 302 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 ADAM5Q6NVV9 412 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 SSX8Q7RTT4 187 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 SATL1Q86VE3 508 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 PHC2Q8IXK0 858 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 OR10AC1Q8NH08 325 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 HAVCR2Q8TDQ0 301 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 GHSRQ92847 366 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 APOBEC3DQ96AK3 386 aaPredicted RBP16.73■□□□□ 0.27
USP39-218ENST00000493829 PGLYRP3Q96LB9 341 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 DACH2Q96NX9 599 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 SOX7Q9BT81 388 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 C1QTNF5Q9BXJ0 243 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 COMMD4Q9H0A8 199 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 OR10A2Q9H208 303 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 ISYNA1Q9NPH2 558 aa16.73■□□□□ 0.27
USP39-218ENST00000493829 SPTBN1Q01082 2364 aaKnown RBP16.73■□□□□ 0.27
USP39-218ENST00000493829 LOC107986453A0A1B0GWG9 222 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 PAX7P23759 505 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 PTAFRP25105 342 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 RPL5P46777 297 aaKnown RBP16.72■□□□□ 0.27
USP39-218ENST00000493829 RGS6P49758 472 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 SNTB2Q13425 540 aaKnown RBP16.72■□□□□ 0.27
USP39-218ENST00000493829 MEX3BQ6ZN04 569 aaKnown RBP16.72■□□□□ 0.27
USP39-218ENST00000493829 ELMOD2Q8IZ81 293 aa16.72■□□□□ 0.27
USP39-218ENST00000493829 RGP1Q92546 391 aaPredicted RBP16.72■□□□□ 0.27
USP39-218ENST00000493829 FAM71F1Q96KD3 344 aaPredicted RBP16.72■□□□□ 0.27
USP39-218ENST00000493829 STARD10Q9Y365 291 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms