RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 IL1RAPQ9NPH3 570 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 CD300AQ9UGN4 299 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 ZNF823P16415 610 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 GGT2P36268 569 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 TPTEP56180 551 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.62■□□□□ 0.41
VSX1-206ENST00000444511 CLEC12AQ5QGZ9 265 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 PGBD2Q6P3X8 592 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 ZDHHC21Q8IVQ6 265 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 BCL6BQ8N143 479 aaPredicted RBP17.62■□□□□ 0.41
VSX1-206ENST00000444511 OR52L1Q8NGH7 329 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 SLCO4A1Q96BD0 722 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 NEIL1Q96FI4 390 aaPredicted RBP17.62■□□□□ 0.41
VSX1-206ENST00000444511 TMEM246Q9BRR3 403 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 MS4A7Q9GZW8 240 aaPredicted RBP17.62■□□□□ 0.41
VSX1-206ENST00000444511 KCNG2Q9UJ96 466 aa17.62■□□□□ 0.41
VSX1-206ENST00000444511 A0A1B0GWJ7 208 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 PRTN3P24158 256 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 CD80P33681 288 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 PAX8Q06710 450 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 ZNF404Q494X3 552 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 FAM201AQ5SY85 155 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 LRRN1Q6UXK5 716 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 PGAP1Q75T13 922 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 NLRC3Q7RTR2 1065 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 MRPL21Q7Z2W9 205 aaKnown RBP17.61■□□□□ 0.41
VSX1-206ENST00000444511 NAA40Q86UY6 237 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 OR8B3Q8NGG8 313 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 SGMS2Q8NHU3 365 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 SPRYD4Q8WW59 207 aaPredicted RBP17.61■□□□□ 0.41
VSX1-206ENST00000444511 SPTSSAQ969W0 71 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 DUX5Q96PT3 197 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 OR8B2Q96RD0 313 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 EGLN3Q9H6Z9 239 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 PNRC2Q9NPJ4 139 aaKnown RBP17.61■□□□□ 0.41
VSX1-206ENST00000444511 MRPL22Q9NWU5 206 aaKnown RBP17.61■□□□□ 0.41
VSX1-206ENST00000444511 TAGLN3Q9UI15 199 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 CDH10Q9Y6N8 788 aa17.61■□□□□ 0.41
VSX1-206ENST00000444511 DNAJC9-AS1A6NH13 148 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 M0R135 149 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 ATP8B1O43520 1251 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 SPRY1O43609 319 aaPredicted RBP17.6■□□□□ 0.41
VSX1-206ENST00000444511 FSTL3O95633 263 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 PMELP40967 661 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 GATA4P43694 442 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 MXRA7P84157 204 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 BAMBIQ13145 260 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 TUSC1Q2TAM9 212 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 RPL13AP3Q6NVV1 102 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 C16orf89Q6UX73 402 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 PARP8Q8N3A8 854 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 CELF2-AS1Q8N7Q2 184 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 PROKR2Q8NFJ6 384 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 OR11L1Q8NGX0 322 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 RAB40AQ8WXH6 277 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 ERGIC1Q969X5 290 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 ZNF799Q96GE5 643 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 MAP6Q96JE9 813 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 ZMAT3Q9HA38 289 aaKnown RBP17.6■□□□□ 0.41
VSX1-206ENST00000444511 NDE1Q9NXR1 346 aa17.6■□□□□ 0.41
VSX1-206ENST00000444511 IGHV2-70DA0A0C4DH43 119 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 KRT36O76013 467 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 PPIAL4GP0DN37 164 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 HKR1P10072 659 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 PYCR1P32322 319 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 PITPNBP48739 271 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 RAD23AP54725 363 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 PAX2Q02962 417 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 FOXL1Q12952 345 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 MAB21L1Q13394 359 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 DEFB107AQ8IZN7 70 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 CYB561A3Q8NBI2 242 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 OR2T4Q8NH00 348 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 ARL8BQ9NVJ2 186 aa17.59■□□□□ 0.41
VSX1-206ENST00000444511 NOP16Q9Y3C1 178 aaKnown RBP17.59■□□□□ 0.41
VSX1-206ENST00000444511 IGHV3OR16-10A0A075B7F0 116 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 TNFRSF11BO00300 401 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 IGHV4-38-2P0DP08 117 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 EGR1P18146 543 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 CD200P41217 278 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 OR8G1Q15617 311 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 SPATS1Q496A3 300 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 PRAMEF6Q5VXH4 476 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 DCDC5Q6ZRR9 648 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 LINC00471Q8N535 108 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 OR9Q2Q8NGE9 314 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 Q8TCH9 128 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 ZNF48Q96MX3 618 aaPredicted RBP17.58■□□□□ 0.4
VSX1-206ENST00000444511 SLC22A4Q9H015 551 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 UFSP2Q9NUQ7 469 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 CLN8Q9UBY8 286 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 LYVE1Q9Y5Y7 322 aa17.58■□□□□ 0.4
VSX1-206ENST00000444511 TVP23AA6NH52 213 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 BHLHE40O14503 412 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 FAM20BO75063 409 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 CA6P23280 308 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 RPS27P42677 84 aaKnown RBP17.57■□□□□ 0.4
VSX1-206ENST00000444511 MTNR1AP48039 350 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 HMGA2P52926 109 aa17.57■□□□□ 0.4
VSX1-206ENST00000444511 CYP2R1Q6VVX0 501 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms