RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PCK2Q16822 640 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 ANKRD34AQ69YU3 496 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 OR52I2Q8NH67 350 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 H0Y8G0 127 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 SDCBPO00560 298 aaPredicted RBP15.64■□□□□ 0.09
SHANK1-201ENST00000293441 CNR1P21554 472 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 ABCD3P28288 659 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 SRSF5Q13243 272 aaKnown RBP15.64■□□□□ 0.09
SHANK1-201ENST00000293441 CTU2Q2VPK5 515 aaKnown RBP15.64■□□□□ 0.09
SHANK1-201ENST00000293441 SVBPQ8N300 66 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 TMEM104Q8NE00 496 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 TTC9Q92623 222 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 IGHV5-51A0A0C4DH38 117 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 ZAR1LA6NP61 321 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 HPNP05981 417 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 CEACAM16Q2WEN9 425 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 IKZF5Q9H5V7 419 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 RAF1P04049 648 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 OR1L3Q8NH93 324 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 NARFLQ9H6Q4 476 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 MEOX1P50221 254 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 UBE2G2P60604 165 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 LRFN5Q96NI6 719 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 OSGIN2Q9Y236 505 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 A3GALT2U3KPV4 340 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 FAM90A27PA6NNH2 459 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 FBXL14Q8N1E6 418 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 C15orf54Q8N8G6 183 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 PCED1AQ9H1Q7 454 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 BCL2L10Q9HD36 194 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 P4HTMQ9NXG6 502 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 SLCO1C1Q9NYB5 712 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 CRYZL1O95825 349 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 COL9A1P20849 921 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 S1PR3Q99500 378 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 FLVCR1Q9Y5Y0 555 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 ARRB2P32121 409 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 RNF141Q8WVD5 230 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 PLA2G12AQ9BZM1 189 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 PCYT1BQ9Y5K3 369 aaPredicted RBP15.63■□□□□ 0.09
SHANK1-201ENST00000293441 IGHV1OR15-9A0A0B4J2B8 117 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 OR10A3P58181 314 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 TRA2AQ13595 282 aaKnown RBP eCLIP15.63■□□□□ 0.09
SHANK1-201ENST00000293441 SLC17A1Q14916 467 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 TAF9Q16594 264 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 RHOUQ7L0Q8 258 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 OR2AK2Q8NG84 335 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 TMEM235A6NFC5 223 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 DHHO43323 396 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 DFFBO76075 338 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 IL11RAQ14626 422 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 SPANXN5Q5MJ07 72 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 GABARAPL3Q9BY60 117 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 PARP12Q9H0J9 701 aaKnown RBP15.63■□□□□ 0.09
SHANK1-201ENST00000293441 FZR1Q9UM11 496 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 TRAV17A0A0B4J275 112 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 TMEM200CA6NKL6 621 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 GPM6AP51674 278 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 GABRG1Q8N1C3 465 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 OR10G3Q8NGC4 313 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 OR2G3Q8NGZ4 309 aa15.63■□□□□ 0.09
SHANK1-201ENST00000293441 TRMT61AQ96FX7 289 aaKnown RBP15.63■□□□□ 0.09
SHANK1-201ENST00000293441 GPR37O15354 613 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 TSPAN12O95859 305 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 RFX2P48378 723 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 ZNF85Q03923 595 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 TRIP6Q15654 476 aaKnown RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 OR2A2Q6IF42 318 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 SLC25A26Q70HW3 274 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 ZNF439Q8NDP4 499 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 GNRHR2Q96P88 292 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 SIGLEC11Q96RL6 698 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 ISL1P61371 349 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 UBE2IP63279 158 aaKnown RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 FLI1Q01543 452 aaPredicted RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 VN1R1Q9GZP7 353 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 GABARAPL1Q9H0R8 117 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 SUMO3P55854 103 aaPredicted RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 ISG20L2Q9H9L3 353 aaKnown RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 KCNE3Q9Y6H6 103 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 SSSCA1O60232 199 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 HTRA4P83105 476 aaPredicted RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 ADIRFQ15847 76 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 CXorf67Q86X51 503 aaPredicted RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 FYTTD1Q96QD9 318 aaKnown RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 FN3KRPQ9HA64 309 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 TAF9BQ9HBM6 251 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 ONECUT1Q9UBC0 465 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 SPRY1O43609 319 aaPredicted RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 CDX2Q99626 313 aaPredicted RBP15.62■□□□□ 0.09
SHANK1-201ENST00000293441 RNF150Q9ULK6 438 aa15.62■□□□□ 0.09
SHANK1-201ENST00000293441 A0A1W2PR80 420 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 C2orf76Q3KRA6 126 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 GAB3Q8WWW8 586 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 AIPO00170 330 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 ZNF83P51522 516 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 TMEM182Q6ZP80 229 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-201ENST00000293441 PXT1Q8NFP0 134 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 OR2Z1Q8NG97 314 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 SFT2D1Q8WV19 159 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms