RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SLC25A21Q9BQT8 299 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-227ENST00000640957 SLC17A9Q9BYT1 436 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 TAF9BQ9HBM6 251 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 FGF22Q9HCT0 170 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 CENPMQ9NSP4 180 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 LRRK1Q38SD2 2015 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 PRAMEF26H0Y7S4 382 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 OR6A2O95222 327 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 APODP05090 189 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 RAB5AP20339 215 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 GRK6P43250 576 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 CAV2P51636 162 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 TFF2Q03403 129 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 KIAA0141Q14154 515 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF345Q14585 488 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 USF2Q15853 346 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-227ENST00000640957 PRR22Q8IZ63 422 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 C17orf78Q8N4C9 275 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 NICN1Q9BSH3 213 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 TRIM2Q9C040 744 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 EMC9Q9Y3B6 208 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-227ENST00000640957 ARHGEF17Q96PE2 2063 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-227ENST00000640957 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 TNFSF12O43508 249 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 BRINP1O60477 761 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 IFNA2P01563 188 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 TLX1P31314 330 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-227ENST00000640957 DNASE1L1P49184 302 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 TMEM240Q5SV17 173 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF561Q8N587 486 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 PHYHIPLQ96FC7 376 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 CMTM3Q96MX0 182 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 TOLLIPQ9H0E2 274 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 C1orf198Q9H425 327 aa12.34□□□□□ -0.43
SCARB2-227ENST00000640957 A0A1W2PP11 408 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 EFSO43281 561 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 HCRTR1O43613 425 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 THBS1P07996 1170 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 SLC25A4P12235 298 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 DRD3P35462 400 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 GPR18Q14330 331 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 MEF2DQ14814 521 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 TMEM225Q6GV28 225 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 KTI12Q96EK9 354 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-227ENST00000640957 BANF2Q9H503 90 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
SCARB2-227ENST00000640957 K7EQS6 105 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 SLC17A2O00624 439 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 NUDT14O95848 222 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 CD14P08571 375 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 CSRP1P21291 193 aaKnown RBP12.33□□□□□ -0.44
SCARB2-227ENST00000640957 ADPRHP54922 357 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 ZP2Q05996 745 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 C9orf50Q5SZB4 431 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 ZNF684Q5T5D7 378 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 FBXO42Q6P3S6 717 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 SLC16A9Q7RTY1 509 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 LINC00615Q96LM1 132 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-227ENST00000640957 PTGES2Q9H7Z7 377 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 TBC1D29Q9UFV1 150 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 CACFD1Q9UGQ2 172 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 DAPP1Q9UN19 280 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 C19orf53Q9UNZ5 99 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-227ENST00000640957 CDC14CA4D256 554 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 B3GALT2O43825 422 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 ABHD16AO95870 558 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 ENPP2Q13822 863 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 TSC22D1Q15714 1073 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 MIDNQ504T8 468 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 ULK3Q6PHR2 472 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 LRP11Q86VZ4 500 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 C4orf45Q96LM5 186 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 ASB16Q96NS5 453 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 PLA2G2FQ9BZM2 168 aa12.33□□□□□ -0.44
SCARB2-227ENST00000640957 DOCK8Q8NF50 2099 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 TRBV5-5A0A0J9YX44 114 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 SLC16A7O60669 478 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 RDH16O75452 317 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 PRH1P02810 166 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 ERGP11308 486 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 MESTQ5EB52 335 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 DPY19L2P2Q6ZN68 376 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 PGAP1Q75T13 922 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 ZNF679Q8IYX0 411 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 CDRT4Q8N9R6 151 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 RCBTB1Q8NDN9 531 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 ST6GALNAC5Q9BVH7 336 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 SEBOXQ9HB31 216 aaPredicted RBP12.32□□□□□ -0.44
SCARB2-227ENST00000640957 CCDC163A0A0D9SF12 145 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 P2RY10O00398 339 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 LINC01565O15544 149 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 GLRA1P23415 457 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 PSG6Q00889 435 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
SCARB2-227ENST00000640957 SLC25A42Q86VD7 318 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 OR5D18Q8NGL1 313 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 OR13C3Q8NGS6 347 aa12.32□□□□□ -0.44
SCARB2-227ENST00000640957 C15orf40Q8WUR7 153 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms