RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 CARTPTQ16568 116 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 FAM209AQ5JX71 171 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 SLC35D3Q5M8T2 416 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 TMEM236Q5W0B7 351 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 PLBD1Q6P4A8 553 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 TIGD4Q8IY51 512 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 ZNF540Q8NDQ6 660 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 OR5L1Q8NGL2 311 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 ST7LQ8TDW4 575 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 RDH5Q92781 318 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 HAVCR1Q96D42 359 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 INTS14Q96SY0 518 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 BPESC1Q9GZL8 116 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 SEMA6AQ9H2E6 1030 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 CHODLQ9H9P2 273 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.32□□□□□ -0.44
MKS1-207ENST00000578789 ENOPH1Q9UHY7 261 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 TMEFF2Q9UIK5 374 aaPredicted RBP12.32□□□□□ -0.44
MKS1-207ENST00000578789 PURGQ9UJV8 347 aaKnown RBP12.32□□□□□ -0.44
MKS1-207ENST00000578789 OAZ3Q9UMX2 235 aa12.32□□□□□ -0.44
MKS1-207ENST00000578789 PLSCR5A0PG75 271 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 ZAR1LA6NP61 321 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 ZNF878C9JN71 531 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 M0R135 149 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 TIMM8AO60220 97 aaPredicted RBP12.31□□□□□ -0.44
MKS1-207ENST00000578789 RP2O75695 350 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 IGHV1-46P01743 117 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 CD55P08174 381 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 RAC2P15153 192 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 ACHEP22303 614 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 TPTEP56180 551 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 TMEM249Q2WGJ8 235 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 ZMAT1Q5H9K5 638 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 SLX4IPQ5VYV7 408 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 C12orf73Q69YU5 71 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 CPOQ8IVL8 374 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 YIPF5Q969M3 257 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 SPTSSAQ969W0 71 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 OTULINQ96BN8 352 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 CMBLQ96DG6 245 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 SLAMF6Q96DU3 332 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 ZNF799Q96GE5 643 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 PLEKHA8Q96JA3 519 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 RAB3IPQ96QF0 476 aaPredicted RBP12.31□□□□□ -0.44
MKS1-207ENST00000578789 DIRC2Q96SL1 478 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 OSBPL10Q9BXB5 764 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 PRRG3Q9BZD7 231 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 OR51V1Q9H2C8 321 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 TVP23BQ9NYZ1 205 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 PTTG3PQ9NZH4 202 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 ZDHHC8Q9ULC8 765 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 CSPG4Q6UVK1 2322 aa12.31□□□□□ -0.44
MKS1-207ENST00000578789 TLN2Q9Y4G6 2542 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 IGHV4-61A0A0C4DH41 118 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 F5H5K5 113 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 LYNX1G3V0Z9 82 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 CD5LO43866 347 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 TACSTD2P09758 323 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 LYNX1P0DP58 116 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 IGFBP5P24593 272 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 CCL8P80075 99 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 SNAPC1Q16533 368 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 DRAM2Q6UX65 266 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 Q71RC1 249 aaPredicted RBP12.3□□□□□ -0.44
MKS1-207ENST00000578789 CXXC5Q7LFL8 322 aaKnown RBP12.3□□□□□ -0.44
MKS1-207ENST00000578789 SHFQ7M4L6 423 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 ERI1Q8IV48 349 aaKnown RBP12.3□□□□□ -0.44
MKS1-207ENST00000578789 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 BBS1Q8NFJ9 593 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 OR6N2Q8NGY6 317 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 ZMYND19Q96E35 227 aaPredicted RBP12.3□□□□□ -0.44
MKS1-207ENST00000578789 CIB1Q99828 191 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 PKP2Q99959 881 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 COPS4Q9BT78 406 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 GABARAPL3Q9BY60 117 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 ABCA1O95477 2261 aa12.3□□□□□ -0.44
MKS1-207ENST00000578789 CCDC182A6NF36 153 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 SAC3D1A6NKF1 404 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 SPRY3O43610 288 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 COL8A2P25067 703 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 EPHA2P29317 976 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 CRYBB2P43320 205 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 GRB2P62993 217 aaKnown RBP12.29□□□□□ -0.44
MKS1-207ENST00000578789 EFNB1P98172 346 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 CDK5R2Q13319 367 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 EIF2B1Q14232 305 aaKnown RBP12.29□□□□□ -0.44
MKS1-207ENST00000578789 GGTLC2Q14390 218 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 HLXQ14774 488 aaPredicted RBP12.29□□□□□ -0.44
MKS1-207ENST00000578789 TSTQ16762 297 aaKnown RBP12.29□□□□□ -0.44
MKS1-207ENST00000578789 KLHL12Q53G59 568 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 Q6ZR03 302 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 RHOUQ7L0Q8 258 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 DPY19L4Q7Z388 723 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 RNF133Q8WVZ7 376 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 KCNJ15Q99712 375 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 RBM4BQ9BQ04 359 aaKnown RBP12.29□□□□□ -0.44
MKS1-207ENST00000578789 ABHD6Q9BV23 337 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 TOR3AQ9H497 397 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 SAP30LQ9HAJ7 183 aa12.29□□□□□ -0.44
MKS1-207ENST00000578789 MSL2Q9HCI7 577 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms