RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZNF799Q96GE5 643 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 DOK1Q99704 481 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 OR10A4Q9H209 315 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 BABAM2Q9NXR7 383 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 TMEM269A0A1B0GVZ9 245 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 TRIM64CA6NLI5 447 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 PNPP00491 289 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 SORDQ00796 357 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 TIGD6Q17RP2 521 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 TBC1D28Q2M2D7 210 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 ZNF829Q3KNS6 432 aaPredicted RBP16.81■□□□□ 0.28
USP39-218ENST00000493829 UBE2UQ5VVX9 321 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 DEGS2Q6QHC5 323 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 FAM57BQ71RH2 274 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 PPP1R14AQ96A00 147 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 RNF166Q96A37 237 aaPredicted RBP16.81■□□□□ 0.28
USP39-218ENST00000493829 POM121L2Q96KW2 1035 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 SIRT4Q9Y6E7 314 aaPredicted RBP16.81■□□□□ 0.28
USP39-218ENST00000493829 R4GMQ9 66 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 C5orf63A6NC05 138 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 TUBAL3A6NHL2 446 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 LOC110117498-PIK3R3F6TDL0 507 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 ACSM4P0C7M7 580 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 PPP3CBP16298 524 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 TPTEP56180 551 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 NANOS3P60323 173 aaKnown RBP16.8■□□□□ 0.28
USP39-218ENST00000493829 SPOCK1Q08629 439 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 TSTQ16762 297 aaKnown RBP16.8■□□□□ 0.28
USP39-218ENST00000493829 GFOD2Q3B7J2 385 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 KCTD20Q7Z5Y7 419 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 FCGR1BQ92637 280 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 MUL1Q969V5 352 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 OPALINQ96PE5 141 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 MGLLQ99685 303 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 USB1Q9BQ65 265 aaKnown RBP16.8■□□□□ 0.28
USP39-218ENST00000493829 CDH20Q9HBT6 801 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 FAM206AQ9NX38 181 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 NDRG3Q9UGV2 375 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 SLC22A13Q9Y226 551 aa16.8■□□□□ 0.28
USP39-218ENST00000493829 H3BSH0 61 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 TBX1O43435 398 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 SRSF10O75494 262 aaKnown RBP16.79■□□□□ 0.28
USP39-218ENST00000493829 IGLV1-44P01699 117 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 COX5BP10606 129 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 GP2P55259 537 aaKnown RBP16.79■□□□□ 0.28
USP39-218ENST00000493829 ARMCX4Q5H9R4 360 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 WDR38Q5JTN6 314 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 BCL2L15Q5TBC7 163 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 ARL9Q6T311 187 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 RHOUQ7L0Q8 258 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 SSC4DQ8WTU2 575 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 CRNNQ9UBG3 495 aaPredicted RBP16.79■□□□□ 0.28
USP39-218ENST00000493829 ATPIF1Q9UII2 106 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 ST6GALNAC2Q9UJ37 374 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 PRR14LQ5THK1 2151 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 ADGRG4Q8IZF6 3080 aa16.79■□□□□ 0.28
USP39-218ENST00000493829 OTX1P32242 354 aaPredicted RBP16.78■□□□□ 0.28
USP39-218ENST00000493829 KIR3DL2P43630 455 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 SLC3A1Q07837 685 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 KRTAP27-1Q3LI81 207 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 LIPKQ5VXJ0 399 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 PRSS35Q8N3Z0 413 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 COG8Q96MW5 612 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 NIPAL2Q9H841 368 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 LCATP04180 440 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 FAM157BP0CG42 384 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 CELP19835 753 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 CALCRP30988 508 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 WNT5AP41221 380 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 SNAI3Q3KNW1 292 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 DRAM2Q6UX65 266 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 CATSPERDQ86XM0 798 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 ZNF101Q8IZC7 436 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 OR2G2Q8NGZ5 317 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 PGAM5Q96HS1 289 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 C4orf45Q96LM5 186 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 PBOV1Q9GZY1 135 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 FRRS1LQ9P0K9 344 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 OR52A1Q9UKL2 312 aa16.78■□□□□ 0.28
USP39-218ENST00000493829 USP9XQ93008 2570 aaPredicted RBP16.77■□□□□ 0.28
USP39-218ENST00000493829 TRBV2A0A0J9YWF9 115 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 WIPF3A6NGB9 483 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 TFAP2AP05549 437 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 NAAAQ02083 359 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 MLLT11Q13015 90 aaPredicted RBP16.77■□□□□ 0.28
USP39-218ENST00000493829 ALKBH1Q13686 389 aaKnown RBP16.77■□□□□ 0.28
USP39-218ENST00000493829 CDK5R1Q15078 307 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 RFPL4BQ6ZWI9 263 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 OR8B12Q8NGG6 310 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 ABHD4Q8TB40 342 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 UFD1Q92890 307 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 TMIGD2Q96BF3 282 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 PDCD1LG2Q9BQ51 273 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 MOV10Q9HCE1 1003 aaKnown RBP16.77■□□□□ 0.28
USP39-218ENST00000493829 G6PC2Q9NQR9 355 aa16.77■□□□□ 0.28
USP39-218ENST00000493829 IGHV2OR16-5A0A0B4J2B6 119 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 A1L4Q6 167 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 DCTDP32321 178 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 PRSS12P56730 875 aa16.76■□□□□ 0.27
USP39-218ENST00000493829 TAS2R43P59537 309 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms