RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 F12P00748 615 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 IGHV3-13P01766 116 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 LYNP07948 512 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 ACSM4P0C7M7 580 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 CLUP10909 449 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 CCL2P13500 99 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 ANPEPP15144 967 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 RAC2P15153 192 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 CFL1P23528 166 aaKnown RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 CDKN1AP38936 164 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 WNT5AP41221 380 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 SNRPGP62308 76 aaKnown RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 APOFQ13790 326 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 EIF2B1Q14232 305 aaKnown RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 TRIP10Q15642 601 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 SNCBQ16143 134 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 NKPD1Q17RQ9 610 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 AADACL4Q5VUY2 407 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 CORO6Q6QEF8 472 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 CLEC2AQ6UVW9 174 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 FBXW12Q6X9E4 464 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 COLCA1Q6ZS62 124 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 MEPCEQ7L2J0 689 aaKnown RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 SLC16A9Q7RTY1 509 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 DPY19L4Q7Z388 723 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 TGIF2LYQ8IUE0 185 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 LINC00346Q8IVM7 164 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 ZNF101Q8IZC7 436 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 TCEANCQ8N8B7 351 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 ZNF555Q8NEP9 628 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 OR52H1Q8NGJ2 320 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 OTOSQ8NHW6 89 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 KLF14Q8TD94 323 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 ST7LQ8TDW4 575 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 RNF133Q8WVZ7 376 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 SLAMF6Q96DU3 332 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 ZMYND19Q96E35 227 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 ZNF799Q96GE5 643 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 MARS2Q96GW9 593 aaKnown RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 CNN2Q99439 309 aaKnown RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 TEAD3Q99594 435 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 KCNJ15Q99712 375 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 APOL4Q9BPW4 351 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 HCAR1Q9BXC0 346 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 MRPL37Q9BZE1 423 aaKnown RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 RGCCQ9H4X1 137 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 NKIRAS2Q9NYR9 191 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 DUSP13Q9UII6 198 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 ZNF391Q9UJN7 358 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 LAMP5Q9UJQ1 280 aa7.35□□□□□ -1.23
SSBP1-208ENST00000469123 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 NOP16Q9Y3C1 178 aaKnown RBP7.35□□□□□ -1.23
SSBP1-208ENST00000469123 CSMD2Q7Z408 3487 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 TMEM129A0AVI4 362 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 ACOD1A6NK06 481 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 E9PQ18 207 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 F5H5K5 113 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 CASQ2O14958 399 aaPredicted RBP7.34□□□□□ -1.23
SSBP1-208ENST00000469123 SLC16A6O15403 523 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 XRCC2O43543 280 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 ZNF254O75437 659 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 IGHV4-39P01824 125 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 ADH4P08319 380 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 KITLGP21583 273 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 HSD11B1P28845 292 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 EPHA2P29317 976 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 HTR1FP30939 366 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 DCTDP32321 178 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 SLC6A9P48067 706 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 TTC23Q5W5X9 447 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 TMEM154Q6P9G4 183 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 RFPL4BQ6ZWI9 263 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.34□□□□□ -1.23
SSBP1-208ENST00000469123 ZNF540Q8NDQ6 660 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 BBS1Q8NFJ9 593 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 FAM81AQ8TBF8 368 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 SLC25A40Q8TBP6 338 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 ZFAND2BQ8WV99 257 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 MRPL48Q96GC5 212 aaKnown RBP7.34□□□□□ -1.23
SSBP1-208ENST00000469123 MAP6Q96JE9 813 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 Q96MT0 163 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 IL4I1Q96RQ9 567 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 SYT3Q9BQG1 590 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 RHNO1Q9BSD3 238 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 MROQ9BYG7 248 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 OR2J1Q9GZK6 312 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 SLC22A4Q9H015 551 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 VCX3BQ9H321 246 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 MED20Q9H944 212 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 TAAR3PQ9P1P4 343 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 ZDHHC8Q9ULC8 765 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 PCDHGB1Q9Y5G3 927 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 GMPPBQ9Y5P6 360 aa7.34□□□□□ -1.23
SSBP1-208ENST00000469123 CCDC182A6NF36 153 aa7.33□□□□□ -1.24
SSBP1-208ENST00000469123 ERICH4A6NGS2 130 aa7.33□□□□□ -1.24
SSBP1-208ENST00000469123 C17orf100A8MU93 164 aa7.33□□□□□ -1.24
SSBP1-208ENST00000469123 TIMM8AO60220 97 aaPredicted RBP7.33□□□□□ -1.24
SSBP1-208ENST00000469123 NGFP01138 241 aa7.33□□□□□ -1.24
SSBP1-208ENST00000469123 LCATP04180 440 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms