RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 CDH15P55291 814 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 PSG7Q13046 419 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 TAF13Q15543 124 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 KCNJ8Q15842 424 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 ATP6AP1Q15904 470 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 TMEM155Q4W5P6 130 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 SLC35F1Q5T1Q4 408 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 C1orf146Q5VVC0 180 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 KCTD18Q6PI47 426 aaPredicted RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 LRP11Q86VZ4 500 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 ZNF101Q8IZC7 436 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 C1orf87Q8N0U7 546 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 MUC20Q8N307 709 aaPredicted RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 PAQR4Q8N4S7 273 aaPredicted RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 ATG16L2Q8NAA4 619 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 OR9Q2Q8NGE9 314 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 TRUB1Q8WWH5 349 aaKnown RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 UTP4Q969X6 686 aaKnown RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 CCDC124Q96CT7 223 aaKnown RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 CMBLQ96DG6 245 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 DMRTB1Q96MA1 342 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 KCNJ15Q99712 375 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 KRTAP3-3Q9BYR6 98 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 KRTAP3-2Q9BYR7 98 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 EGLN3Q9H6Z9 239 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 EMC7Q9NPA0 242 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 YAE1D1Q9NRH1 226 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 PAPOLBQ9NRJ5 636 aaKnown RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 TMEM100Q9NV29 134 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 H2AFY2Q9P0M6 372 aaPredicted RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 IL20RAQ9UHF4 553 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 STARD10Q9Y365 291 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 U3KQV3 271 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 RTTNQ86VV8 2226 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.44□□□□□ -1.54
USP54-202ENST00000413442 LOC100289279A0A1B0GTE1 492 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 LRRC30A6NM36 301 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 H7C1C5 153 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 J3QLI3 93 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 DCTN6O00399 190 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 PHYHO14832 338 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 TIPRLO75663 272 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 RP2O75695 350 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 MPZL1O95297 269 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 TGFAP01135 160 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 IGHV1-46P01743 117 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 HPXP02790 462 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 LCATP04180 440 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 ACSM4P0C7M7 580 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 FAM157CP0CG43 387 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 IGHV4-31P0DP07 118 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 NAT2P11245 290 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 SPI1P17947 270 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 FLNAP21333 2647 aaKnown RBP5.44□□□□□ -1.54
USP54-202ENST00000413442 COL8A2P25067 703 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 GSTT1P30711 240 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 ALDH3B1P43353 468 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 GATA4P43694 442 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 RAD23AP54725 363 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 LCN6P62502 163 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 CCL8P80075 99 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 TNFAIP6P98066 277 aaPredicted RBP5.44□□□□□ -1.54
USP54-202ENST00000413442 KRTAP1-1Q07627 177 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 GGTLC2Q14390 218 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 GINS1Q14691 196 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 RSPO1Q2MKA7 263 aaPredicted RBP5.44□□□□□ -1.54
USP54-202ENST00000413442 CLEC12AQ5QGZ9 265 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 C6orf52Q5T4I8 152 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 LCN1P1Q5VSP4 162 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 ACSM5Q6NUN0 579 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 FAHD1Q6P587 224 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 CCDC121Q6ZUS5 278 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 PGAP1Q75T13 922 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 ASRGL1Q7L266 308 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 KRT74Q7RTS7 529 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 MEX3DQ86XN8 651 aaKnown RBP5.44□□□□□ -1.54
USP54-202ENST00000413442 SPICQ8N5J4 248 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 ZNF283Q8N7M2 679 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 ICA1LQ8NDH6 482 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 CCDC54Q8NEL0 328 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 CSNK2A3Q8NEV1 391 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 SDR9C7Q8NEX9 313 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 ASB17Q8WXJ9 295 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 SPSB4Q96A44 273 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 CENPNQ96H22 339 aaPredicted RBP5.44□□□□□ -1.54
USP54-202ENST00000413442 TSSK2Q96PF2 358 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 INTS14Q96SY0 518 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 NIPSNAP1Q9BPW8 284 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 SLC30A2Q9BRI3 323 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 REPIN1Q9BWE0 567 aaKnown RBP5.44□□□□□ -1.54
USP54-202ENST00000413442 BEX2Q9BXY8 128 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 BPESC1Q9GZL8 116 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 YIPF3Q9GZM5 350 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 SHARPINQ9H0F6 387 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 ZNF275Q9NSD4 429 aaPredicted RBP5.44□□□□□ -1.54
USP54-202ENST00000413442 C14orf119Q9NWQ9 140 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 MRPL22Q9NWU5 206 aaKnown RBP5.44□□□□□ -1.54
USP54-202ENST00000413442 HAO2Q9NYQ3 351 aa5.44□□□□□ -1.54
USP54-202ENST00000413442 MRPL15Q9P015 296 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms