RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 OR2AE1Q8NHA4 323 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 SPACA9Q96E40 222 aaPredicted RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 GLI4P10075 376 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 NME1P15531 152 aaKnown RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 RGS7BPQ6MZT1 257 aaPredicted RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 PAQR6Q6TCH4 344 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 B3GALT5Q9Y2C3 310 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 A0A0A6YYD5 115 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 ANKUB1A6NFN9 424 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 PPM1DO15297 605 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 KLK8O60259 260 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 MT-CO3P00414 261 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 EGR3Q06889 387 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 AGERQ15109 404 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 HSD17B11Q8NBQ5 300 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 OR13C5Q8NGS8 318 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 SMCO4Q9NRQ5 59 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 FABP7O15540 132 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 MBTPS2O43462 519 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 FZD6O60353 706 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 TFF2Q03403 129 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 WIPI1Q5MNZ9 446 aaPredicted RBP15.67■□□□□ 0.1
SHANK1-201ENST00000293441 NUDT9Q9BW91 350 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 TNFRSF12AQ9NP84 129 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 KIAA0100Q14667 2235 aaKnown RBP15.67■□□□□ 0.1
SHANK1-201ENST00000293441 HAAOP46952 286 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 SLC35A2P78381 396 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 CELF2-AS1Q8N7Q2 184 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 SLC35E1Q96K37 410 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 FSCN3Q9NQT6 498 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 ING1Q9UK53 422 aaPredicted RBP15.67■□□□□ 0.1
SHANK1-201ENST00000293441 PCNPQ8WW12 178 aaKnown RBP15.67■□□□□ 0.1
SHANK1-201ENST00000293441 MRPS24Q96EL2 167 aaKnown RBP15.67■□□□□ 0.1
SHANK1-201ENST00000293441 RNF167Q9H6Y7 350 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 AKR7LQ8NHP1 331 aa15.67■□□□□ 0.1
SHANK1-201ENST00000293441 K7EQM0 130 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 DIO1P49895 249 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 RPS16P62249 146 aaKnown RBP15.66■□□□□ 0.1
SHANK1-201ENST00000293441 LSRQ86X29 649 aaPredicted RBP15.66■□□□□ 0.1
SHANK1-201ENST00000293441 CNRIP1Q96F85 164 aaPredicted RBP15.66■□□□□ 0.1
SHANK1-201ENST00000293441 STRCQ7RTU9 1775 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 TMEM129A0AVI4 362 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 CPEP16870 476 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 Q6ZRG5 221 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 THNSL2Q86YJ6 484 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 OR52H1Q8NGJ2 320 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 GDF2Q9UK05 429 aaPredicted RBP15.66■□□□□ 0.1
SHANK1-201ENST00000293441 HDGFL3Q9Y3E1 203 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 R4GMQ9 66 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 A0A1B0GVG6 124 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 TFAP2AP05549 437 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 CTXN2P0C2S0 81 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF121P58317 390 aaPredicted RBP15.66■□□□□ 0.1
SHANK1-201ENST00000293441 SYT6Q5T7P8 510 aaPredicted RBP15.66■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF816-ZNF321PA0A0X1KG74 233 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 SPRY3O43610 288 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 DMRTC1Q5HYR2 192 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 CDC20BQ86Y33 519 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF321PQ8N8H1 164 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 PINX1Q96BK5 328 aaKnown RBP15.66■□□□□ 0.1
SHANK1-201ENST00000293441 FBXO17Q96EF6 278 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 ALKBH3Q96Q83 286 aaPredicted RBP15.66■□□□□ 0.1
SHANK1-201ENST00000293441 KCNIP2Q9NS61 270 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 NUP205Q92621 2012 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 WDR1O75083 606 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 FABP1P07148 127 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 FCN2Q15485 313 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 SLC38A9Q8NBW4 561 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 SLC30A7Q8NEW0 376 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 OR1J1Q8NGS3 322 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 ZDHHC16Q969W1 377 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 SLC22A13Q9Y226 551 aa15.66■□□□□ 0.1
SHANK1-201ENST00000293441 TRAF3IP2O43734 574 aaPredicted RBP15.65■□□□□ 0.1
SHANK1-201ENST00000293441 ELFN2Q5R3F8 820 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 FAM173AQ9BQD7 235 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 SLC25A21Q9BQT8 299 aaPredicted RBP15.65■□□□□ 0.1
SHANK1-201ENST00000293441 ZFP92A6NM28 416 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 TBPP20226 339 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 OPRM1P35372 400 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 KIRREL2Q6UWL6 708 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 TMEM200AQ86VY9 491 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 FAM109AQ8N4B1 249 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 OR2I1PQ8NGU4 316 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 SLC25A46Q96AG3 418 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 IL9P15248 144 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 DUSP1P28562 367 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 CCR9P51686 369 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF75AQ96N20 296 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 PSMB3P49720 205 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 FAM74A1Q5RGS3 127 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 TMEM92Q6UXU6 159 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 NLRC3Q7RTR2 1065 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 FAM26EQ8N5C1 309 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 OR2A14Q96R47 310 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 Q7L0L9 218 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 NOXO1Q8NFA2 376 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 SEH1LQ96EE3 360 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 FBXL4Q9UKA2 621 aa15.65■□□□□ 0.1
SHANK1-201ENST00000293441 ADH4P08319 380 aa15.64■□□□□ 0.09
SHANK1-201ENST00000293441 NKX2-1P43699 371 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms