RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 TINAGL1Q9GZM7 467 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 CNTD2Q9H8S5 307 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 NXT2Q9NPJ8 142 aaKnown RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 IGHV3OR16-12A0A075B7B8 117 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 C2CD4BA6NLJ0 364 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 CBR3O75828 277 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 DNAJB5O75953 348 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 MGPP08493 103 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 PRSS8Q16651 343 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 IGSF11Q5DX21 431 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 TMEM25Q86YD3 366 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 Q8IYB0 196 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 C5orf17Q8NAS9 161 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 HARBI1Q96MB7 349 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 COL25A1Q9BXS0 654 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 HSPE1-MOB4S4R3N1 261 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 PEAK1Q9H792 1746 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 FAM157BP0CG42 384 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 FAM106AQ4KMX7 169 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 FAM26EQ8N5C1 309 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 TMEM101Q96IK0 257 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 PCED1AQ9H1Q7 454 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 SLC25A5P05141 298 aaKnown RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 TM4SF1P30408 202 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ZNF90Q03938 601 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 HERPUD1Q15011 391 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ZNF404Q494X3 552 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 OR10K2Q6IF99 312 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 C15orf39Q6ZRI6 1047 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 C1orf210Q8IVY1 113 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ETFBKMTQ8IXQ9 262 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 SDR9C7Q8NEX9 313 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 OR10K1Q8NGX5 313 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 EXTL1Q92935 676 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 EDA2RQ9HAV5 297 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 RYDENQ9NUL5 291 aaKnown RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 FGF2P09038 288 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 NFATC3Q12968 1075 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ANKRD55Q3KP44 614 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 CLDN19Q8N6F1 224 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ZCCHC14Q8WYQ9 949 aaKnown RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 PIGMQ9H3S5 423 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 SHPRHQ149N8 1683 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 HCRTR1O43613 425 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 OPRD1P41143 372 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 NTHL1P78549 312 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 NHLH1Q02575 133 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 NHLH2Q02577 135 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 OR1Q1Q15612 314 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 TP53I3Q53FA7 332 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ASTLQ6HA08 431 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 LNX1Q8TBB1 728 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 RTN4IP1Q8WWV3 396 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 CCL17Q92583 94 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 CDS1Q92903 461 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 METTL26Q96S19 204 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ZDHHC11Q9H8X9 412 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 WDR76Q9H967 626 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 UCK1Q9HA47 277 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 MYH15Q9Y2K3 1946 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 FAM189A1O60320 539 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 HOXD4P09016 255 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 COX7A1P24310 79 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 CTSSP25774 331 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 STT3AP46977 705 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 SLC18A1P54219 525 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 PNLIPRP2P54317 469 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ZNF280AP59817 542 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 SUMO1P63165 101 aaKnown RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 COTL1Q14019 142 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 SOWAHAQ2M3V2 549 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 THEM4Q5T1C6 240 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 CYB5R2Q6BCY4 276 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 LIAT1Q6ZQX7 453 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 HIST2H3AQ71DI3 136 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 FCRLAQ7L513 359 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ZFAND4Q86XD8 727 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 GATA5Q9BWX5 397 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 SLC22A13Q9Y226 551 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 FAM159BA6NKW6 160 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 H0YGG7 62 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 H0YIV9 168 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 COX5AP20674 150 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 TSPOP30536 169 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 H3F3AP84243 136 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 SLC9A3R2Q15599 337 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 NCR3LG1Q68D85 454 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 LILRA2Q8N149 483 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 KLHDC1Q8N7A1 406 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 SLC26A10Q8NG04 563 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 ZMYND19Q96E35 227 aaPredicted RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 PIK3IP1Q96FE7 263 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 TOX2Q96NM4 488 aa3.15□□□□□ -1.91
NEB-201ENST00000172853 SSU72Q9NP77 194 aaKnown RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 ZNF638Q14966 1978 aaKnown RBP3.15□□□□□ -1.91
NEB-201ENST00000172853 RGPD4Q7Z3J3 1758 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 BMPR1BO00238 502 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 RPA2P15927 270 aa3.14□□□□□ -1.91
NEB-201ENST00000172853 TAGLN2P37802 199 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms