RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SLC33A1O00400 549 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-227ENST00000640957 GLCEO94923 617 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 GNALP38405 381 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 ACTBP60709 375 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 ACTG1P63261 375 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 RPL13AP3Q6NVV1 102 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 PAQR4Q8N4S7 273 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-227ENST00000640957 CCDC54Q8NEL0 328 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 SLC25A44Q96H78 314 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-227ENST00000640957 KIRREL1Q96J84 757 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 FAM83CQ9BQN1 747 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 MMP26Q9NRE1 261 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-227ENST00000640957 FRMPD3Q5JV73 1810 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 C17orf113A0A1B0GUU1 675 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 OR10H2O60403 315 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 CTSVO60911 334 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 KNG1P01042 644 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 CRHP06850 196 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 CASP6P55212 293 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 RIPPLY1Q0D2K3 151 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 RAB32Q13637 225 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 C4orf17Q53FE4 359 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 TMEM35AQ53FP2 167 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 PYY3Q5JQD4 70 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 SLC2A12Q8TD20 617 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 PATE1Q8WXA2 126 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF524Q96C55 264 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 SMOC1Q9H4F8 434 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 RGCCQ9H4X1 137 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 LPAR3Q9UBY5 353 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 ETV7Q9Y603 341 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 TRIOBPQ9H2D6 2365 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 WISP1O95388 367 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 S100A8P05109 93 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 ZBTB25P24278 435 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 HTR2CP28335 458 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 LAP3P28838 519 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 CMPK1P30085 196 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 GJA4P35212 333 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 TRA2BP62995 288 aaKnown RBP12.36□□□□□ -0.43
SCARB2-227ENST00000640957 ZIC1Q15915 447 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 ITPRIPL2Q3MIP1 535 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 VWA2Q5GFL6 755 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 FIP1L1Q6UN15 594 aaKnown RBP12.36□□□□□ -0.43
SCARB2-227ENST00000640957 DRAM2Q6UX65 266 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 MITD1Q8WV92 249 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 POM121Q96HA1 1249 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 ARL5BQ96KC2 179 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 DCBLD2Q96PD2 775 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 PCBD2Q9H0N5 130 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 FGF19O95750 216 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 CSTAP01040 98 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 CD79AP11912 226 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 RAB2AP61019 212 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 PTCRAQ6ISU1 281 aaPredicted RBP12.36□□□□□ -0.43
SCARB2-227ENST00000640957 OR4D6Q8NGJ1 314 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF417Q8TAU3 575 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 TCTEX1D2Q8WW35 142 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 SCARF2Q96GP6 870 aaPredicted RBP12.36□□□□□ -0.43
SCARB2-227ENST00000640957 SERTAD3Q9UJW9 196 aa12.36□□□□□ -0.43
SCARB2-227ENST00000640957 UBE2CO00762 179 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 MBTPS2O43462 519 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 MDKP21741 143 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-227ENST00000640957 ALG10Q5BKT4 473 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 PRAMEF8Q5VWM4 474 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 PRAMEF7Q5VXH5 474 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF343Q6P1L6 599 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 CBLN3Q6UW01 205 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 COX15Q7KZN9 410 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 SSX9Q7RTT3 188 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 LINC00346Q8IVM7 164 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 OR10D4PQ8NGN7 298 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 OR10C1Q96KK4 312 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 EPHX3Q9H6B9 360 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 SEC61A2Q9H9S3 476 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 DNAJB12Q9NXW2 375 aaKnown RBP12.35□□□□□ -0.43
SCARB2-227ENST00000640957 DHDHQ9UQ10 334 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 FGF16O43320 207 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF354AO60765 605 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-227ENST00000640957 APBB3O95704 486 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 RUNX3Q13761 415 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 DEFB119Q8N690 84 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 CCDC3Q9BQI4 270 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 GRHPRQ9UBQ7 328 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 NOSIPQ9Y314 301 aaKnown RBP12.35□□□□□ -0.43
SCARB2-227ENST00000640957 TDRD6O60522 2096 aaKnown RBP12.35□□□□□ -0.43
SCARB2-227ENST00000640957 WIPF3A6NGB9 483 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 SLC35G6P0C7Q6 338 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 RNH1P13489 461 aaKnown RBP12.35□□□□□ -0.43
SCARB2-227ENST00000640957 PRF1P14222 555 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 EIF2S3P41091 472 aaKnown RBP12.35□□□□□ -0.43
SCARB2-227ENST00000640957 GSK3AP49840 483 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 HGFACQ04756 655 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 C1orf61Q13536 156 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF425Q6IV72 752 aa12.35□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF565Q8N9K5 539 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms